Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9347 | 28264;28265;28266 | chr2:178711197;178711196;178711195 | chr2:179575924;179575923;179575922 |
N2AB | 9030 | 27313;27314;27315 | chr2:178711197;178711196;178711195 | chr2:179575924;179575923;179575922 |
N2A | 8103 | 24532;24533;24534 | chr2:178711197;178711196;178711195 | chr2:179575924;179575923;179575922 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.012 | None | 0.491 | 0.196 | 0.438383285633 | gnomAD-4.0.0 | 1.5911E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76644E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs1382932532 | -0.298 | 0.004 | None | 0.37 | 0.075 | 0.18995819373 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
V/L | rs1382932532 | -0.298 | 0.004 | None | 0.37 | 0.075 | 0.18995819373 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2539 | likely_benign | 0.3236 | benign | -2.036 | Highly Destabilizing | 0.012 | N | 0.491 | neutral | None | None | None | None | N |
V/C | 0.7023 | likely_pathogenic | 0.7146 | pathogenic | -1.574 | Destabilizing | 0.864 | D | 0.628 | neutral | None | None | None | None | N |
V/D | 0.5407 | ambiguous | 0.6871 | pathogenic | -2.327 | Highly Destabilizing | 0.214 | N | 0.692 | prob.neutral | None | None | None | None | N |
V/E | 0.3738 | ambiguous | 0.4869 | ambiguous | -2.16 | Highly Destabilizing | 0.055 | N | 0.637 | neutral | None | None | None | None | N |
V/F | 0.1122 | likely_benign | 0.1381 | benign | -1.292 | Destabilizing | None | N | 0.459 | neutral | None | None | None | None | N |
V/G | 0.3141 | likely_benign | 0.4103 | ambiguous | -2.538 | Highly Destabilizing | 0.055 | N | 0.66 | neutral | None | None | None | None | N |
V/H | 0.5551 | ambiguous | 0.6415 | pathogenic | -2.238 | Highly Destabilizing | 0.001 | N | 0.571 | neutral | None | None | None | None | N |
V/I | 0.0648 | likely_benign | 0.0654 | benign | -0.665 | Destabilizing | None | N | 0.186 | neutral | None | None | None | None | N |
V/K | 0.4735 | ambiguous | 0.5873 | pathogenic | -1.682 | Destabilizing | 0.072 | N | 0.64 | neutral | None | None | None | None | N |
V/L | 0.1234 | likely_benign | 0.1433 | benign | -0.665 | Destabilizing | 0.004 | N | 0.37 | neutral | None | None | None | None | N |
V/M | 0.1098 | likely_benign | 0.1273 | benign | -0.631 | Destabilizing | 0.214 | N | 0.633 | neutral | None | None | None | None | N |
V/N | 0.3959 | ambiguous | 0.4963 | ambiguous | -1.836 | Destabilizing | 0.214 | N | 0.688 | prob.neutral | None | None | None | None | N |
V/P | 0.9124 | likely_pathogenic | 0.9574 | pathogenic | -1.092 | Destabilizing | 0.356 | N | 0.651 | neutral | None | None | None | None | N |
V/Q | 0.382 | ambiguous | 0.4754 | ambiguous | -1.76 | Destabilizing | 0.356 | N | 0.659 | neutral | None | None | None | None | N |
V/R | 0.3851 | ambiguous | 0.4799 | ambiguous | -1.419 | Destabilizing | 0.356 | N | 0.676 | prob.neutral | None | None | None | None | N |
V/S | 0.2865 | likely_benign | 0.3657 | ambiguous | -2.486 | Highly Destabilizing | 0.038 | N | 0.616 | neutral | None | None | None | None | N |
V/T | 0.1976 | likely_benign | 0.2291 | benign | -2.18 | Highly Destabilizing | 0.001 | N | 0.277 | neutral | None | None | None | None | N |
V/W | 0.6333 | likely_pathogenic | 0.7381 | pathogenic | -1.744 | Destabilizing | 0.676 | D | 0.65 | neutral | None | None | None | None | N |
V/Y | 0.3744 | ambiguous | 0.4486 | ambiguous | -1.386 | Destabilizing | 0.001 | N | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.