Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9355 | 28288;28289;28290 | chr2:178711173;178711172;178711171 | chr2:179575900;179575899;179575898 |
N2AB | 9038 | 27337;27338;27339 | chr2:178711173;178711172;178711171 | chr2:179575900;179575899;179575898 |
N2A | 8111 | 24556;24557;24558 | chr2:178711173;178711172;178711171 | chr2:179575900;179575899;179575898 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs763942844 | 0.009 | None | None | 0.175 | 0.091 | 0.213573922156 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
T/I | rs763942844 | 0.009 | None | None | 0.175 | 0.091 | 0.213573922156 | gnomAD-4.0.0 | 4.78929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29622E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0822 | likely_benign | 0.0904 | benign | -0.857 | Destabilizing | 0.005 | N | 0.188 | neutral | None | None | None | None | N |
T/C | 0.3698 | ambiguous | 0.4229 | ambiguous | -0.726 | Destabilizing | 0.356 | N | 0.531 | neutral | None | None | None | None | N |
T/D | 0.3643 | ambiguous | 0.4143 | ambiguous | -1.341 | Destabilizing | 0.038 | N | 0.475 | neutral | None | None | None | None | N |
T/E | 0.2357 | likely_benign | 0.2766 | benign | -1.303 | Destabilizing | 0.072 | N | 0.474 | neutral | None | None | None | None | N |
T/F | 0.1606 | likely_benign | 0.1855 | benign | -1.013 | Destabilizing | 0.214 | N | 0.592 | neutral | None | None | None | None | N |
T/G | 0.2464 | likely_benign | 0.2887 | benign | -1.133 | Destabilizing | 0.031 | N | 0.479 | neutral | None | None | None | None | N |
T/H | 0.1591 | likely_benign | 0.185 | benign | -1.542 | Destabilizing | 0.356 | N | 0.551 | neutral | None | None | None | None | N |
T/I | 0.0851 | likely_benign | 0.0925 | benign | -0.201 | Destabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
T/K | 0.1052 | likely_benign | 0.1333 | benign | -0.831 | Destabilizing | 0.055 | N | 0.471 | neutral | None | None | None | None | N |
T/L | 0.0878 | likely_benign | 0.0938 | benign | -0.201 | Destabilizing | 0.002 | N | 0.263 | neutral | None | None | None | None | N |
T/M | 0.0793 | likely_benign | 0.0883 | benign | 0.192 | Stabilizing | 0.214 | N | 0.54 | neutral | None | None | None | None | N |
T/N | 0.1131 | likely_benign | 0.1247 | benign | -1.069 | Destabilizing | 0.001 | N | 0.117 | neutral | None | None | None | None | N |
T/P | 0.5728 | likely_pathogenic | 0.6686 | pathogenic | -0.388 | Destabilizing | 0.106 | N | 0.551 | neutral | None | None | None | None | N |
T/Q | 0.1524 | likely_benign | 0.1845 | benign | -1.26 | Destabilizing | 0.356 | N | 0.583 | neutral | None | None | None | None | N |
T/R | 0.0812 | likely_benign | 0.1022 | benign | -0.627 | Destabilizing | 0.106 | N | 0.573 | neutral | None | None | None | None | N |
T/S | 0.1075 | likely_benign | 0.1191 | benign | -1.192 | Destabilizing | 0.001 | N | 0.105 | neutral | None | None | None | None | N |
T/V | 0.0803 | likely_benign | 0.0863 | benign | -0.388 | Destabilizing | None | N | 0.116 | neutral | None | None | None | None | N |
T/W | 0.4546 | ambiguous | 0.5507 | ambiguous | -1.039 | Destabilizing | 0.864 | D | 0.561 | neutral | None | None | None | None | N |
T/Y | 0.181 | likely_benign | 0.219 | benign | -0.722 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.