Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9359 | 28300;28301;28302 | chr2:178711161;178711160;178711159 | chr2:179575888;179575887;179575886 |
N2AB | 9042 | 27349;27350;27351 | chr2:178711161;178711160;178711159 | chr2:179575888;179575887;179575886 |
N2A | 8115 | 24568;24569;24570 | chr2:178711161;178711160;178711159 | chr2:179575888;179575887;179575886 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.794 | None | 0.631 | 0.309 | 0.604580495079 | gnomAD-4.0.0 | 6.84185E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9946E-07 | 0 | 0 |
N/S | rs794727988 | None | 0.183 | None | 0.518 | 0.131 | 0.159798565429 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs794727988 | None | 0.183 | None | 0.518 | 0.131 | 0.159798565429 | gnomAD-4.0.0 | 1.23935E-06 | None | None | None | None | N | None | 1.33497E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09796E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2308 | likely_benign | 0.1826 | benign | -1.259 | Destabilizing | 0.228 | N | 0.529 | neutral | None | None | None | None | N |
N/C | 0.3324 | likely_benign | 0.2469 | benign | -0.425 | Destabilizing | 0.983 | D | 0.658 | neutral | None | None | None | None | N |
N/D | 0.2392 | likely_benign | 0.1801 | benign | -1.24 | Destabilizing | 0.101 | N | 0.518 | neutral | None | None | None | None | N |
N/E | 0.2581 | likely_benign | 0.2257 | benign | -1.037 | Destabilizing | 0.004 | N | 0.295 | neutral | None | None | None | None | N |
N/F | 0.4934 | ambiguous | 0.4476 | ambiguous | -0.718 | Destabilizing | 0.716 | D | 0.623 | neutral | None | None | None | None | N |
N/G | 0.3685 | ambiguous | 0.3128 | benign | -1.667 | Destabilizing | 0.228 | N | 0.48 | neutral | None | None | None | None | N |
N/H | 0.0669 | likely_benign | 0.0579 | benign | -1.047 | Destabilizing | 0.004 | N | 0.462 | neutral | None | None | None | None | N |
N/I | 0.2054 | likely_benign | 0.1609 | benign | -0.174 | Destabilizing | 0.794 | D | 0.631 | neutral | None | None | None | None | N |
N/K | 0.1898 | likely_benign | 0.1635 | benign | -0.278 | Destabilizing | 0.007 | N | 0.313 | neutral | None | None | None | None | N |
N/L | 0.1819 | likely_benign | 0.1631 | benign | -0.174 | Destabilizing | 0.418 | N | 0.583 | neutral | None | None | None | None | N |
N/M | 0.2934 | likely_benign | 0.2362 | benign | 0.125 | Stabilizing | 0.836 | D | 0.595 | neutral | None | None | None | None | N |
N/P | 0.9235 | likely_pathogenic | 0.9365 | pathogenic | -0.508 | Destabilizing | 0.593 | D | 0.624 | neutral | None | None | None | None | N |
N/Q | 0.1698 | likely_benign | 0.1446 | benign | -0.924 | Destabilizing | 0.004 | N | 0.307 | neutral | None | None | None | None | N |
N/R | 0.1531 | likely_benign | 0.1537 | benign | -0.357 | Destabilizing | 0.264 | N | 0.508 | neutral | None | None | None | None | N |
N/S | 0.0975 | likely_benign | 0.0804 | benign | -1.25 | Destabilizing | 0.183 | N | 0.518 | neutral | None | None | None | None | N |
N/T | 0.115 | likely_benign | 0.0871 | benign | -0.84 | Destabilizing | 0.351 | N | 0.505 | neutral | None | None | None | None | N |
N/V | 0.2214 | likely_benign | 0.1657 | benign | -0.508 | Destabilizing | 0.593 | D | 0.584 | neutral | None | None | None | None | N |
N/W | 0.6528 | likely_pathogenic | 0.6416 | pathogenic | -0.431 | Destabilizing | 0.983 | D | 0.671 | neutral | None | None | None | None | N |
N/Y | 0.1309 | likely_benign | 0.1115 | benign | -0.184 | Destabilizing | 0.487 | N | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.