Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9368 | 28327;28328;28329 | chr2:178711134;178711133;178711132 | chr2:179575861;179575860;179575859 |
N2AB | 9051 | 27376;27377;27378 | chr2:178711134;178711133;178711132 | chr2:179575861;179575860;179575859 |
N2A | 8124 | 24595;24596;24597 | chr2:178711134;178711133;178711132 | chr2:179575861;179575860;179575859 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs1299434800 | -0.105 | 0.029 | None | 0.551 | 0.162 | 0.463243292966 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
A/E | rs1299434800 | -0.105 | 0.029 | None | 0.551 | 0.162 | 0.463243292966 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5641 | likely_pathogenic | 0.5079 | ambiguous | -0.756 | Destabilizing | 0.676 | D | 0.531 | neutral | None | None | None | None | N |
A/D | 0.3144 | likely_benign | 0.4012 | ambiguous | -0.099 | Destabilizing | 0.038 | N | 0.577 | neutral | None | None | None | None | N |
A/E | 0.2224 | likely_benign | 0.2757 | benign | -0.124 | Destabilizing | 0.029 | N | 0.551 | neutral | None | None | None | None | N |
A/F | 0.3339 | likely_benign | 0.3382 | benign | -0.631 | Destabilizing | 0.214 | N | 0.587 | neutral | None | None | None | None | N |
A/G | 0.1625 | likely_benign | 0.1696 | benign | -0.807 | Destabilizing | None | N | 0.137 | neutral | None | None | None | None | N |
A/H | 0.5061 | ambiguous | 0.5412 | ambiguous | -0.875 | Destabilizing | 0.676 | D | 0.565 | neutral | None | None | None | None | N |
A/I | 0.2003 | likely_benign | 0.1855 | benign | -0.023 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
A/K | 0.4519 | ambiguous | 0.5248 | ambiguous | -0.736 | Destabilizing | 0.038 | N | 0.553 | neutral | None | None | None | None | N |
A/L | 0.1683 | likely_benign | 0.1709 | benign | -0.023 | Destabilizing | 0.006 | N | 0.441 | neutral | None | None | None | None | N |
A/M | 0.2187 | likely_benign | 0.2109 | benign | -0.159 | Destabilizing | 0.016 | N | 0.405 | neutral | None | None | None | None | N |
A/N | 0.2943 | likely_benign | 0.3129 | benign | -0.499 | Destabilizing | 0.12 | N | 0.601 | neutral | None | None | None | None | N |
A/P | 0.3287 | likely_benign | 0.447 | ambiguous | -0.157 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
A/Q | 0.3245 | likely_benign | 0.3649 | ambiguous | -0.571 | Destabilizing | 0.214 | N | 0.568 | neutral | None | None | None | None | N |
A/R | 0.3613 | ambiguous | 0.4271 | ambiguous | -0.533 | Destabilizing | 0.214 | N | 0.571 | neutral | None | None | None | None | N |
A/S | 0.0967 | likely_benign | 0.0989 | benign | -0.973 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
A/T | 0.0895 | likely_benign | 0.0889 | benign | -0.878 | Destabilizing | 0.029 | N | 0.499 | neutral | None | None | None | None | N |
A/V | 0.1135 | likely_benign | 0.1126 | benign | -0.157 | Destabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
A/W | 0.693 | likely_pathogenic | 0.7371 | pathogenic | -0.951 | Destabilizing | 0.864 | D | 0.627 | neutral | None | None | None | None | N |
A/Y | 0.4745 | ambiguous | 0.4971 | ambiguous | -0.513 | Destabilizing | 0.356 | N | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.