Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9387 | 28384;28385;28386 | chr2:178711077;178711076;178711075 | chr2:179575804;179575803;179575802 |
N2AB | 9070 | 27433;27434;27435 | chr2:178711077;178711076;178711075 | chr2:179575804;179575803;179575802 |
N2A | 8143 | 24652;24653;24654 | chr2:178711077;178711076;178711075 | chr2:179575804;179575803;179575802 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.012 | None | 0.405 | 0.077 | 0.18274738541 | gnomAD-4.0.0 | 1.65249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95098E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3502 | ambiguous | 0.36 | ambiguous | -0.478 | Destabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | N |
R/C | 0.3248 | likely_benign | 0.2961 | benign | -0.454 | Destabilizing | 0.864 | D | 0.496 | neutral | None | None | None | None | N |
R/D | 0.6532 | likely_pathogenic | 0.6692 | pathogenic | 0.032 | Stabilizing | 0.016 | N | 0.467 | neutral | None | None | None | None | N |
R/E | 0.3546 | ambiguous | 0.3749 | ambiguous | 0.13 | Stabilizing | 0.016 | N | 0.367 | neutral | None | None | None | None | N |
R/F | 0.5021 | ambiguous | 0.4999 | ambiguous | -0.469 | Destabilizing | 0.628 | D | 0.497 | neutral | None | None | None | None | N |
R/G | 0.2729 | likely_benign | 0.2922 | benign | -0.749 | Destabilizing | 0.024 | N | 0.435 | neutral | None | None | None | None | N |
R/H | 0.1085 | likely_benign | 0.1123 | benign | -1.102 | Destabilizing | 0.356 | N | 0.517 | neutral | None | None | None | None | N |
R/I | 0.2606 | likely_benign | 0.2739 | benign | 0.226 | Stabilizing | 0.356 | N | 0.537 | neutral | None | None | None | None | N |
R/K | 0.0789 | likely_benign | 0.0856 | benign | -0.48 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
R/L | 0.2199 | likely_benign | 0.2339 | benign | 0.226 | Stabilizing | 0.031 | N | 0.483 | neutral | None | None | None | None | N |
R/M | 0.2367 | likely_benign | 0.2493 | benign | -0.112 | Destabilizing | 0.56 | D | 0.525 | neutral | None | None | None | None | N |
R/N | 0.4356 | ambiguous | 0.4392 | ambiguous | 0.002 | Stabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
R/P | 0.7543 | likely_pathogenic | 0.8017 | pathogenic | 0.013 | Stabilizing | 0.136 | N | 0.543 | neutral | None | None | None | None | N |
R/Q | 0.1072 | likely_benign | 0.1122 | benign | -0.181 | Destabilizing | 0.038 | N | 0.455 | neutral | None | None | None | None | N |
R/S | 0.3672 | ambiguous | 0.3652 | ambiguous | -0.655 | Destabilizing | 0.012 | N | 0.405 | neutral | None | None | None | None | N |
R/T | 0.1901 | likely_benign | 0.1932 | benign | -0.391 | Destabilizing | 0.024 | N | 0.463 | neutral | None | None | None | None | N |
R/V | 0.3317 | likely_benign | 0.3485 | ambiguous | 0.013 | Stabilizing | 0.072 | N | 0.529 | neutral | None | None | None | None | N |
R/W | 0.2017 | likely_benign | 0.2121 | benign | -0.251 | Destabilizing | 0.828 | D | 0.513 | neutral | None | None | None | None | N |
R/Y | 0.3946 | ambiguous | 0.3821 | ambiguous | 0.085 | Stabilizing | 0.628 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.