Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9401 | 28426;28427;28428 | chr2:178710896;178710895;178710894 | chr2:179575623;179575622;179575621 |
N2AB | 9084 | 27475;27476;27477 | chr2:178710896;178710895;178710894 | chr2:179575623;179575622;179575621 |
N2A | 8157 | 24694;24695;24696 | chr2:178710896;178710895;178710894 | chr2:179575623;179575622;179575621 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.772 | None | 0.281 | 0.311 | 0.463586170655 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41546E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2948 | likely_benign | 0.3077 | benign | -1.271 | Destabilizing | 0.103 | N | 0.268 | neutral | None | None | None | None | I |
I/C | 0.672 | likely_pathogenic | 0.668 | pathogenic | -0.442 | Destabilizing | 0.991 | D | 0.311 | neutral | None | None | None | None | I |
I/D | 0.5124 | ambiguous | 0.5263 | ambiguous | -0.967 | Destabilizing | 0.561 | D | 0.346 | neutral | None | None | None | None | I |
I/E | 0.3552 | ambiguous | 0.3498 | ambiguous | -1.035 | Destabilizing | 0.209 | N | 0.301 | neutral | None | None | None | None | I |
I/F | 0.1588 | likely_benign | 0.1644 | benign | -1.1 | Destabilizing | 0.772 | D | 0.281 | neutral | None | None | None | None | I |
I/G | 0.541 | ambiguous | 0.567 | pathogenic | -1.518 | Destabilizing | 0.561 | D | 0.327 | neutral | None | None | None | None | I |
I/H | 0.3263 | likely_benign | 0.3443 | ambiguous | -0.808 | Destabilizing | 0.901 | D | 0.323 | neutral | None | None | None | None | I |
I/K | 0.1792 | likely_benign | 0.18 | benign | -0.76 | Destabilizing | 0.017 | N | 0.239 | neutral | None | None | None | None | I |
I/L | 0.1227 | likely_benign | 0.1273 | benign | -0.697 | Destabilizing | 0.08 | N | 0.142 | neutral | None | None | None | None | I |
I/M | 0.1078 | likely_benign | 0.1124 | benign | -0.331 | Destabilizing | 0.873 | D | 0.288 | neutral | None | None | None | None | I |
I/N | 0.1713 | likely_benign | 0.1845 | benign | -0.387 | Destabilizing | 0.491 | N | 0.355 | neutral | None | None | None | None | I |
I/P | 0.8245 | likely_pathogenic | 0.8089 | pathogenic | -0.856 | Destabilizing | 0.722 | D | 0.368 | neutral | None | None | None | None | I |
I/Q | 0.2555 | likely_benign | 0.2664 | benign | -0.668 | Destabilizing | 0.047 | N | 0.273 | neutral | None | None | None | None | I |
I/R | 0.1424 | likely_benign | 0.1455 | benign | -0.086 | Destabilizing | 0.004 | N | 0.243 | neutral | None | None | None | None | I |
I/S | 0.2103 | likely_benign | 0.2201 | benign | -0.856 | Destabilizing | 0.166 | N | 0.275 | neutral | None | None | None | None | I |
I/T | 0.1883 | likely_benign | 0.1825 | benign | -0.823 | Destabilizing | 0.005 | N | 0.114 | neutral | None | None | None | None | I |
I/V | 0.094 | likely_benign | 0.0893 | benign | -0.856 | Destabilizing | 0.001 | N | 0.132 | neutral | None | None | None | None | I |
I/W | 0.7281 | likely_pathogenic | 0.7409 | pathogenic | -1.141 | Destabilizing | 0.991 | D | 0.321 | neutral | None | None | None | None | I |
I/Y | 0.3697 | ambiguous | 0.3851 | ambiguous | -0.929 | Destabilizing | 0.901 | D | 0.365 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.