Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9408 | 28447;28448;28449 | chr2:178710875;178710874;178710873 | chr2:179575602;179575601;179575600 |
N2AB | 9091 | 27496;27497;27498 | chr2:178710875;178710874;178710873 | chr2:179575602;179575601;179575600 |
N2A | 8164 | 24715;24716;24717 | chr2:178710875;178710874;178710873 | chr2:179575602;179575601;179575600 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs767417518 | -1.35 | 0.722 | None | 0.525 | 0.284 | 0.366659145958 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65948E-04 |
A/T | rs767417518 | -1.35 | 0.722 | None | 0.525 | 0.284 | 0.366659145958 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs767417518 | -1.35 | 0.722 | None | 0.525 | 0.284 | 0.366659145958 | gnomAD-4.0.0 | 3.04472E-06 | None | None | None | None | N | None | 3.49369E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20491E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3695 | ambiguous | 0.4193 | ambiguous | -1.089 | Destabilizing | 0.996 | D | 0.563 | neutral | None | None | None | None | N |
A/D | 0.436 | ambiguous | 0.4626 | ambiguous | -1.829 | Destabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | N |
A/E | 0.3604 | ambiguous | 0.3884 | ambiguous | -1.832 | Destabilizing | 0.961 | D | 0.612 | neutral | None | None | None | None | N |
A/F | 0.3723 | ambiguous | 0.3881 | ambiguous | -1.158 | Destabilizing | 0.923 | D | 0.629 | neutral | None | None | None | None | N |
A/G | 0.1159 | likely_benign | 0.1323 | benign | -1.482 | Destabilizing | 0.008 | N | 0.186 | neutral | None | None | None | None | N |
A/H | 0.5355 | ambiguous | 0.6025 | pathogenic | -1.685 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | N |
A/I | 0.1992 | likely_benign | 0.2564 | benign | -0.511 | Destabilizing | 0.372 | N | 0.501 | neutral | None | None | None | None | N |
A/K | 0.4602 | ambiguous | 0.5128 | ambiguous | -1.545 | Destabilizing | 0.961 | D | 0.615 | neutral | None | None | None | None | N |
A/L | 0.1716 | likely_benign | 0.2114 | benign | -0.511 | Destabilizing | 0.415 | N | 0.506 | neutral | None | None | None | None | N |
A/M | 0.2034 | likely_benign | 0.2573 | benign | -0.392 | Destabilizing | 0.923 | D | 0.612 | neutral | None | None | None | None | N |
A/N | 0.3543 | ambiguous | 0.3943 | ambiguous | -1.298 | Destabilizing | 0.923 | D | 0.637 | neutral | None | None | None | None | N |
A/P | 0.5981 | likely_pathogenic | 0.667 | pathogenic | -0.696 | Destabilizing | 0.983 | D | 0.621 | neutral | None | None | None | None | N |
A/Q | 0.4242 | ambiguous | 0.474 | ambiguous | -1.442 | Destabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | N |
A/R | 0.3705 | ambiguous | 0.4154 | ambiguous | -1.173 | Destabilizing | 0.961 | D | 0.64 | neutral | None | None | None | None | N |
A/S | 0.1154 | likely_benign | 0.1282 | benign | -1.626 | Destabilizing | 0.722 | D | 0.518 | neutral | None | None | None | None | N |
A/T | 0.0852 | likely_benign | 0.1085 | benign | -1.542 | Destabilizing | 0.722 | D | 0.525 | neutral | None | None | None | None | N |
A/V | 0.0974 | likely_benign | 0.1264 | benign | -0.696 | Destabilizing | 0.003 | N | 0.159 | neutral | None | None | None | None | N |
A/W | 0.7606 | likely_pathogenic | 0.7991 | pathogenic | -1.565 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | N |
A/Y | 0.5295 | ambiguous | 0.5669 | pathogenic | -1.18 | Destabilizing | 0.961 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.