Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9424 | 28495;28496;28497 | chr2:178710827;178710826;178710825 | chr2:179575554;179575553;179575552 |
N2AB | 9107 | 27544;27545;27546 | chr2:178710827;178710826;178710825 | chr2:179575554;179575553;179575552 |
N2A | 8180 | 24763;24764;24765 | chr2:178710827;178710826;178710825 | chr2:179575554;179575553;179575552 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs748778927 | 0.3 | 0.27 | None | 0.317 | 0.279 | 0.193865811164 | gnomAD-2.1.1 | 7.13E-06 | None | None | None | None | I | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.8E-06 | 0 |
Q/K | rs748778927 | 0.3 | 0.27 | None | 0.317 | 0.279 | 0.193865811164 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/K | rs748778927 | 0.3 | 0.27 | None | 0.317 | 0.279 | 0.193865811164 | gnomAD-4.0.0 | 4.33777E-06 | None | None | None | None | I | None | 5.34045E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54274E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1653 | likely_benign | 0.2028 | benign | -0.154 | Destabilizing | 0.013 | N | 0.103 | neutral | None | None | None | None | I |
Q/C | 0.7722 | likely_pathogenic | 0.8544 | pathogenic | 0.051 | Stabilizing | 0.981 | D | 0.337 | neutral | None | None | None | None | I |
Q/D | 0.4025 | ambiguous | 0.4903 | ambiguous | -0.041 | Destabilizing | 0.543 | D | 0.33 | neutral | None | None | None | None | I |
Q/E | 0.0959 | likely_benign | 0.0937 | benign | -0.083 | Destabilizing | 0.01 | N | 0.115 | neutral | None | None | None | None | I |
Q/F | 0.622 | likely_pathogenic | 0.7449 | pathogenic | -0.436 | Destabilizing | 0.893 | D | 0.423 | neutral | None | None | None | None | I |
Q/G | 0.275 | likely_benign | 0.34 | benign | -0.307 | Destabilizing | 0.495 | N | 0.277 | neutral | None | None | None | None | I |
Q/H | 0.265 | likely_benign | 0.3329 | benign | -0.123 | Destabilizing | 0.927 | D | 0.411 | neutral | None | None | None | None | I |
Q/I | 0.3695 | ambiguous | 0.4742 | ambiguous | 0.157 | Stabilizing | 0.329 | N | 0.306 | neutral | None | None | None | None | I |
Q/K | 0.1066 | likely_benign | 0.1268 | benign | 0.032 | Stabilizing | 0.27 | N | 0.317 | neutral | None | None | None | None | I |
Q/L | 0.1236 | likely_benign | 0.1458 | benign | 0.157 | Stabilizing | 0.002 | N | 0.103 | neutral | None | None | None | None | I |
Q/M | 0.3457 | ambiguous | 0.4242 | ambiguous | 0.262 | Stabilizing | 0.085 | N | 0.223 | neutral | None | None | None | None | I |
Q/N | 0.3184 | likely_benign | 0.3967 | ambiguous | -0.281 | Destabilizing | 0.704 | D | 0.395 | neutral | None | None | None | None | I |
Q/P | 0.0991 | likely_benign | 0.1553 | benign | 0.08 | Stabilizing | 0.784 | D | 0.456 | neutral | None | None | None | None | I |
Q/R | 0.1178 | likely_benign | 0.1442 | benign | 0.229 | Stabilizing | 0.006 | N | 0.173 | neutral | None | None | None | None | I |
Q/S | 0.1874 | likely_benign | 0.2712 | benign | -0.258 | Destabilizing | 0.329 | N | 0.323 | neutral | None | None | None | None | I |
Q/T | 0.2119 | likely_benign | 0.2762 | benign | -0.158 | Destabilizing | 0.495 | N | 0.316 | neutral | None | None | None | None | I |
Q/V | 0.2349 | likely_benign | 0.3079 | benign | 0.08 | Stabilizing | 0.013 | N | 0.125 | neutral | None | None | None | None | I |
Q/W | 0.5569 | ambiguous | 0.6784 | pathogenic | -0.456 | Destabilizing | 0.995 | D | 0.321 | neutral | None | None | None | None | I |
Q/Y | 0.4375 | ambiguous | 0.5611 | ambiguous | -0.187 | Destabilizing | 0.981 | D | 0.433 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.