Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9426 | 28501;28502;28503 | chr2:178710821;178710820;178710819 | chr2:179575548;179575547;179575546 |
N2AB | 9109 | 27550;27551;27552 | chr2:178710821;178710820;178710819 | chr2:179575548;179575547;179575546 |
N2A | 8182 | 24769;24770;24771 | chr2:178710821;178710820;178710819 | chr2:179575548;179575547;179575546 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.994 | None | 0.619 | 0.362 | 0.734446920103 | gnomAD-4.0.0 | 3.4208E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59769E-06 | 0 | 1.65634E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7074 | likely_pathogenic | 0.8604 | pathogenic | -2.415 | Highly Destabilizing | 0.992 | D | 0.499 | neutral | None | None | None | None | I |
I/C | 0.9211 | likely_pathogenic | 0.9666 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | I |
I/D | 0.976 | likely_pathogenic | 0.9936 | pathogenic | -2.514 | Highly Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
I/E | 0.9261 | likely_pathogenic | 0.9765 | pathogenic | -2.395 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
I/F | 0.2511 | likely_benign | 0.6119 | pathogenic | -1.545 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
I/G | 0.9194 | likely_pathogenic | 0.9751 | pathogenic | -2.867 | Highly Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
I/H | 0.9222 | likely_pathogenic | 0.983 | pathogenic | -2.243 | Highly Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
I/K | 0.8612 | likely_pathogenic | 0.9542 | pathogenic | -1.883 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | I |
I/L | 0.1424 | likely_benign | 0.2211 | benign | -1.159 | Destabilizing | 0.889 | D | 0.355 | neutral | None | None | None | None | I |
I/M | 0.1188 | likely_benign | 0.2088 | benign | -0.942 | Destabilizing | 0.889 | D | 0.391 | neutral | None | None | None | None | I |
I/N | 0.807 | likely_pathogenic | 0.9339 | pathogenic | -1.913 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
I/P | 0.8726 | likely_pathogenic | 0.9278 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
I/Q | 0.8422 | likely_pathogenic | 0.9511 | pathogenic | -1.955 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
I/R | 0.7921 | likely_pathogenic | 0.9302 | pathogenic | -1.374 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | I |
I/S | 0.7652 | likely_pathogenic | 0.9026 | pathogenic | -2.556 | Highly Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
I/T | 0.7722 | likely_pathogenic | 0.8903 | pathogenic | -2.314 | Highly Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
I/V | 0.0981 | likely_benign | 0.1171 | benign | -1.554 | Destabilizing | 0.889 | D | 0.41 | neutral | None | None | None | None | I |
I/W | 0.9006 | likely_pathogenic | 0.9785 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
I/Y | 0.753 | likely_pathogenic | 0.9427 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.