Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9427 | 28504;28505;28506 | chr2:178710818;178710817;178710816 | chr2:179575545;179575544;179575543 |
N2AB | 9110 | 27553;27554;27555 | chr2:178710818;178710817;178710816 | chr2:179575545;179575544;179575543 |
N2A | 8183 | 24772;24773;24774 | chr2:178710818;178710817;178710816 | chr2:179575545;179575544;179575543 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1207669528 | 0.351 | 0.968 | None | 0.581 | 0.23 | 0.126345400529 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1207669528 | 0.351 | 0.968 | None | 0.581 | 0.23 | 0.126345400529 | gnomAD-4.0.0 | 6.84161E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99425E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3949 | ambiguous | 0.4496 | ambiguous | -0.009 | Destabilizing | 0.851 | D | 0.628 | neutral | None | None | None | None | I |
K/C | 0.8239 | likely_pathogenic | 0.8838 | pathogenic | -0.496 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
K/D | 0.648 | likely_pathogenic | 0.6954 | pathogenic | 0.088 | Stabilizing | 0.976 | D | 0.634 | neutral | None | None | None | None | I |
K/E | 0.2298 | likely_benign | 0.2381 | benign | 0.119 | Stabilizing | 0.896 | D | 0.579 | neutral | None | None | None | None | I |
K/F | 0.7862 | likely_pathogenic | 0.8533 | pathogenic | -0.154 | Destabilizing | 0.988 | D | 0.732 | prob.delet. | None | None | None | None | I |
K/G | 0.5713 | likely_pathogenic | 0.6524 | pathogenic | -0.219 | Destabilizing | 0.919 | D | 0.627 | neutral | None | None | None | None | I |
K/H | 0.2745 | likely_benign | 0.3459 | ambiguous | -0.348 | Destabilizing | 0.997 | D | 0.667 | neutral | None | None | None | None | I |
K/I | 0.3956 | ambiguous | 0.4538 | ambiguous | 0.469 | Stabilizing | 0.976 | D | 0.732 | prob.delet. | None | None | None | None | I |
K/L | 0.4177 | ambiguous | 0.4821 | ambiguous | 0.469 | Stabilizing | 0.851 | D | 0.628 | neutral | None | None | None | None | I |
K/M | 0.2841 | likely_benign | 0.3217 | benign | 0.035 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
K/N | 0.45 | ambiguous | 0.4997 | ambiguous | -0.077 | Destabilizing | 0.968 | D | 0.581 | neutral | None | None | None | None | I |
K/P | 0.8863 | likely_pathogenic | 0.9378 | pathogenic | 0.337 | Stabilizing | 0.988 | D | 0.682 | prob.neutral | None | None | None | None | I |
K/Q | 0.1403 | likely_benign | 0.1582 | benign | -0.162 | Destabilizing | 0.968 | D | 0.603 | neutral | None | None | None | None | I |
K/R | 0.0831 | likely_benign | 0.091 | benign | -0.106 | Destabilizing | 0.059 | N | 0.258 | neutral | None | None | None | None | I |
K/S | 0.4156 | ambiguous | 0.4689 | ambiguous | -0.547 | Destabilizing | 0.851 | D | 0.569 | neutral | None | None | None | None | I |
K/T | 0.159 | likely_benign | 0.1749 | benign | -0.358 | Destabilizing | 0.103 | N | 0.294 | neutral | None | None | None | None | I |
K/V | 0.3716 | ambiguous | 0.4204 | ambiguous | 0.337 | Stabilizing | 0.851 | D | 0.62 | neutral | None | None | None | None | I |
K/W | 0.7774 | likely_pathogenic | 0.8432 | pathogenic | -0.196 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
K/Y | 0.6739 | likely_pathogenic | 0.7609 | pathogenic | 0.159 | Stabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.