Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9439 | 28540;28541;28542 | chr2:178710782;178710781;178710780 | chr2:179575509;179575508;179575507 |
N2AB | 9122 | 27589;27590;27591 | chr2:178710782;178710781;178710780 | chr2:179575509;179575508;179575507 |
N2A | 8195 | 24808;24809;24810 | chr2:178710782;178710781;178710780 | chr2:179575509;179575508;179575507 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.642 | None | 0.215 | 0.265 | 0.32471235697 | gnomAD-4.0.0 | 4.77295E-06 | None | None | Phosphoserine | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57324E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0764 | likely_benign | 0.0805 | benign | -0.175 | Destabilizing | 0.176 | N | 0.18 | neutral | None | None | Phosphoserine | None | I |
S/C | 0.1934 | likely_benign | 0.2507 | benign | -0.386 | Destabilizing | 0.993 | D | 0.318 | neutral | None | None | Phosphoserine | None | I |
S/D | 0.4031 | ambiguous | 0.5274 | ambiguous | 0.289 | Stabilizing | 0.704 | D | 0.2 | neutral | None | None | Phosphoserine | None | I |
S/E | 0.4753 | ambiguous | 0.6269 | pathogenic | 0.196 | Stabilizing | 0.704 | D | 0.187 | neutral | None | None | Phosphoserine | None | I |
S/F | 0.2321 | likely_benign | 0.2719 | benign | -0.866 | Destabilizing | 0.893 | D | 0.387 | neutral | None | None | Phosphoserine | None | I |
S/G | 0.0902 | likely_benign | 0.1099 | benign | -0.252 | Destabilizing | 0.425 | N | 0.186 | neutral | None | None | Phosphoserine | None | I |
S/H | 0.3241 | likely_benign | 0.4689 | ambiguous | -0.642 | Destabilizing | 0.981 | D | 0.321 | neutral | None | None | Phosphoserine | None | I |
S/I | 0.191 | likely_benign | 0.2467 | benign | -0.108 | Destabilizing | 0.473 | N | 0.425 | neutral | None | None | Phosphoserine | None | I |
S/K | 0.5255 | ambiguous | 0.7422 | pathogenic | -0.338 | Destabilizing | 0.031 | N | 0.165 | neutral | None | None | Phosphoserine | None | I |
S/L | 0.1092 | likely_benign | 0.1189 | benign | -0.108 | Destabilizing | 0.007 | N | 0.208 | neutral | None | None | Phosphoserine | None | I |
S/M | 0.2039 | likely_benign | 0.2712 | benign | -0.143 | Destabilizing | 0.893 | D | 0.313 | neutral | None | None | Phosphoserine | None | I |
S/N | 0.1316 | likely_benign | 0.179 | benign | -0.166 | Destabilizing | 0.642 | D | 0.215 | neutral | None | None | Phosphoserine | None | I |
S/P | 0.0817 | likely_benign | 0.1131 | benign | -0.103 | Destabilizing | 0.007 | N | 0.172 | neutral | None | None | Phosphoserine | None | I |
S/Q | 0.4115 | ambiguous | 0.5896 | pathogenic | -0.342 | Destabilizing | 0.893 | D | 0.263 | neutral | None | None | Phosphoserine | None | I |
S/R | 0.4605 | ambiguous | 0.6655 | pathogenic | -0.159 | Destabilizing | 0.473 | N | 0.359 | neutral | None | None | Phosphoserine | None | I |
S/T | 0.0804 | likely_benign | 0.0887 | benign | -0.249 | Destabilizing | 0.01 | N | 0.115 | neutral | None | None | Phosphoserine | None | I |
S/V | 0.1987 | likely_benign | 0.2462 | benign | -0.103 | Destabilizing | 0.543 | D | 0.321 | neutral | None | None | Phosphoserine | None | I |
S/W | 0.3186 | likely_benign | 0.386 | ambiguous | -0.947 | Destabilizing | 0.995 | D | 0.39 | neutral | None | None | Phosphoserine | None | I |
S/Y | 0.188 | likely_benign | 0.2373 | benign | -0.619 | Destabilizing | 0.981 | D | 0.375 | neutral | None | None | Phosphoserine | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.