Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9440 | 28543;28544;28545 | chr2:178710779;178710778;178710777 | chr2:179575506;179575505;179575504 |
N2AB | 9123 | 27592;27593;27594 | chr2:178710779;178710778;178710777 | chr2:179575506;179575505;179575504 |
N2A | 8196 | 24811;24812;24813 | chr2:178710779;178710778;178710777 | chr2:179575506;179575505;179575504 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs940069606 | None | 1.0 | None | 0.751 | 0.448 | 0.5343833383 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1871 | likely_benign | 0.1971 | benign | -0.202 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
G/C | 0.4992 | ambiguous | 0.5095 | ambiguous | -0.891 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
G/D | 0.5125 | ambiguous | 0.4566 | ambiguous | 0.005 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
G/E | 0.5672 | likely_pathogenic | 0.5155 | ambiguous | -0.113 | Destabilizing | 0.991 | D | 0.508 | neutral | None | None | None | None | N |
G/F | 0.773 | likely_pathogenic | 0.7987 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
G/H | 0.6316 | likely_pathogenic | 0.6719 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/I | 0.5592 | ambiguous | 0.5856 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
G/K | 0.6645 | likely_pathogenic | 0.6982 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/L | 0.6234 | likely_pathogenic | 0.6642 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/M | 0.689 | likely_pathogenic | 0.7251 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/N | 0.4576 | ambiguous | 0.4739 | ambiguous | -0.401 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
G/P | 0.9024 | likely_pathogenic | 0.9157 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
G/Q | 0.5483 | ambiguous | 0.5867 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
G/R | 0.4668 | ambiguous | 0.491 | ambiguous | -0.334 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
G/S | 0.1279 | likely_benign | 0.123 | benign | -0.645 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
G/T | 0.2414 | likely_benign | 0.2605 | benign | -0.666 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/V | 0.3905 | ambiguous | 0.4092 | ambiguous | -0.183 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
G/W | 0.6387 | likely_pathogenic | 0.6469 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
G/Y | 0.7333 | likely_pathogenic | 0.7591 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.