Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9451 | 28576;28577;28578 | chr2:178710746;178710745;178710744 | chr2:179575473;179575472;179575471 |
N2AB | 9134 | 27625;27626;27627 | chr2:178710746;178710745;178710744 | chr2:179575473;179575472;179575471 |
N2A | 8207 | 24844;24845;24846 | chr2:178710746;178710745;178710744 | chr2:179575473;179575472;179575471 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs777096848 | -0.591 | 0.351 | None | 0.545 | 0.193 | 0.0920862733494 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
S/R | rs777096848 | -0.591 | 0.351 | None | 0.545 | 0.193 | 0.0920862733494 | gnomAD-4.0.0 | 6.84188E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51902E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0875 | likely_benign | 0.0936 | benign | -0.342 | Destabilizing | 0.002 | N | 0.121 | neutral | None | None | None | None | N |
S/C | 0.1435 | likely_benign | 0.1872 | benign | -0.221 | Destabilizing | 0.001 | N | 0.303 | neutral | None | None | None | None | N |
S/D | 0.3077 | likely_benign | 0.4496 | ambiguous | -1.508 | Destabilizing | 0.22 | N | 0.332 | neutral | None | None | None | None | N |
S/E | 0.3341 | likely_benign | 0.5391 | ambiguous | -1.398 | Destabilizing | 0.22 | N | 0.333 | neutral | None | None | None | None | N |
S/F | 0.1625 | likely_benign | 0.2047 | benign | -0.242 | Destabilizing | 0.497 | N | 0.603 | neutral | None | None | None | None | N |
S/G | 0.1319 | likely_benign | 0.1545 | benign | -0.683 | Destabilizing | 0.081 | N | 0.292 | neutral | None | None | None | None | N |
S/H | 0.1836 | likely_benign | 0.3367 | benign | -1.384 | Destabilizing | 0.859 | D | 0.523 | neutral | None | None | None | None | N |
S/I | 0.0799 | likely_benign | 0.121 | benign | 0.487 | Stabilizing | None | N | 0.277 | neutral | None | None | None | None | N |
S/K | 0.2806 | likely_benign | 0.5681 | pathogenic | -0.608 | Destabilizing | 0.22 | N | 0.333 | neutral | None | None | None | None | N |
S/L | 0.0912 | likely_benign | 0.106 | benign | 0.487 | Stabilizing | 0.025 | N | 0.367 | neutral | None | None | None | None | N |
S/M | 0.1435 | likely_benign | 0.1815 | benign | 0.653 | Stabilizing | 0.497 | N | 0.529 | neutral | None | None | None | None | N |
S/N | 0.1096 | likely_benign | 0.1605 | benign | -1.08 | Destabilizing | 0.175 | N | 0.373 | neutral | None | None | None | None | N |
S/P | 0.7519 | likely_pathogenic | 0.8545 | pathogenic | 0.246 | Stabilizing | 0.364 | N | 0.539 | neutral | None | None | None | None | N |
S/Q | 0.3066 | likely_benign | 0.519 | ambiguous | -0.926 | Destabilizing | 0.667 | D | 0.455 | neutral | None | None | None | None | N |
S/R | 0.21 | likely_benign | 0.434 | ambiguous | -0.897 | Destabilizing | 0.351 | N | 0.545 | neutral | None | None | None | None | N |
S/T | 0.0544 | likely_benign | 0.0591 | benign | -0.681 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
S/V | 0.1133 | likely_benign | 0.1468 | benign | 0.246 | Stabilizing | 0.025 | N | 0.367 | neutral | None | None | None | None | N |
S/W | 0.249 | likely_benign | 0.3549 | ambiguous | -0.623 | Destabilizing | 0.958 | D | 0.588 | neutral | None | None | None | None | N |
S/Y | 0.1342 | likely_benign | 0.1853 | benign | -0.198 | Destabilizing | 0.667 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.