Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9457 | 28594;28595;28596 | chr2:178710728;178710727;178710726 | chr2:179575455;179575454;179575453 |
N2AB | 9140 | 27643;27644;27645 | chr2:178710728;178710727;178710726 | chr2:179575455;179575454;179575453 |
N2A | 8213 | 24862;24863;24864 | chr2:178710728;178710727;178710726 | chr2:179575455;179575454;179575453 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.001 | None | 0.266 | 0.085 | 0.532168211543 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2233 | likely_benign | 0.1942 | benign | -1.037 | Destabilizing | 0.157 | N | 0.505 | neutral | None | None | None | None | N |
L/C | 0.5714 | likely_pathogenic | 0.556 | ambiguous | -0.853 | Destabilizing | 0.909 | D | 0.646 | neutral | None | None | None | None | N |
L/D | 0.6538 | likely_pathogenic | 0.6051 | pathogenic | -0.021 | Destabilizing | 0.567 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/E | 0.3154 | likely_benign | 0.2902 | benign | -0.06 | Destabilizing | 0.567 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/F | 0.1374 | likely_benign | 0.1472 | benign | -0.729 | Destabilizing | 0.331 | N | 0.511 | neutral | None | None | None | None | N |
L/G | 0.4093 | ambiguous | 0.4089 | ambiguous | -1.284 | Destabilizing | 0.567 | D | 0.607 | neutral | None | None | None | None | N |
L/H | 0.2082 | likely_benign | 0.2232 | benign | -0.425 | Destabilizing | 0.883 | D | 0.696 | prob.neutral | None | None | None | None | N |
L/I | 0.1146 | likely_benign | 0.0829 | benign | -0.475 | Destabilizing | 0.046 | N | 0.443 | neutral | None | None | None | None | N |
L/K | 0.1872 | likely_benign | 0.2253 | benign | -0.505 | Destabilizing | 0.567 | D | 0.591 | neutral | None | None | None | None | N |
L/M | 0.1112 | likely_benign | 0.1066 | benign | -0.478 | Destabilizing | 0.567 | D | 0.548 | neutral | None | None | None | None | N |
L/N | 0.322 | likely_benign | 0.2791 | benign | -0.327 | Destabilizing | 0.567 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/P | 0.3419 | ambiguous | 0.344 | ambiguous | -0.628 | Destabilizing | 0.859 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/Q | 0.1015 | likely_benign | 0.116 | benign | -0.515 | Destabilizing | 0.726 | D | 0.675 | neutral | None | None | None | None | N |
L/R | 0.1442 | likely_benign | 0.171 | benign | 0.023 | Stabilizing | 0.667 | D | 0.673 | neutral | None | None | None | None | N |
L/S | 0.2052 | likely_benign | 0.178 | benign | -0.978 | Destabilizing | 0.033 | N | 0.356 | neutral | None | None | None | None | N |
L/T | 0.184 | likely_benign | 0.1528 | benign | -0.898 | Destabilizing | 0.157 | N | 0.541 | neutral | None | None | None | None | N |
L/V | 0.1156 | likely_benign | 0.08 | benign | -0.628 | Destabilizing | 0.001 | N | 0.266 | neutral | None | None | None | None | N |
L/W | 0.2258 | likely_benign | 0.2673 | benign | -0.708 | Destabilizing | 0.968 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/Y | 0.3692 | ambiguous | 0.3845 | ambiguous | -0.472 | Destabilizing | 0.011 | N | 0.328 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.