Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9468 | 28627;28628;28629 | chr2:178710695;178710694;178710693 | chr2:179575422;179575421;179575420 |
N2AB | 9151 | 27676;27677;27678 | chr2:178710695;178710694;178710693 | chr2:179575422;179575421;179575420 |
N2A | 8224 | 24895;24896;24897 | chr2:178710695;178710694;178710693 | chr2:179575422;179575421;179575420 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.317 | None | 0.735 | 0.186 | 0.442977140156 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85804E-06 | 0 | 0 |
T/S | rs1241585388 | None | None | None | 0.271 | 0.044 | 0.17258766438 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs1241585388 | None | None | None | 0.271 | 0.044 | 0.17258766438 | gnomAD-4.0.0 | 1.31413E-05 | None | None | None | None | N | None | 4.82509E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0958 | likely_benign | 0.1235 | benign | -1.159 | Destabilizing | 0.027 | N | 0.649 | neutral | None | None | None | None | N |
T/C | 0.5386 | ambiguous | 0.6162 | pathogenic | -0.714 | Destabilizing | 0.824 | D | 0.669 | neutral | None | None | None | None | N |
T/D | 0.5271 | ambiguous | 0.689 | pathogenic | -1.427 | Destabilizing | 0.081 | N | 0.721 | prob.delet. | None | None | None | None | N |
T/E | 0.4572 | ambiguous | 0.5153 | ambiguous | -1.213 | Destabilizing | 0.081 | N | 0.724 | prob.delet. | None | None | None | None | N |
T/F | 0.2798 | likely_benign | 0.3359 | benign | -0.846 | Destabilizing | 0.001 | N | 0.67 | neutral | None | None | None | None | N |
T/G | 0.3226 | likely_benign | 0.5072 | ambiguous | -1.582 | Destabilizing | 0.081 | N | 0.713 | prob.delet. | None | None | None | None | N |
T/H | 0.2842 | likely_benign | 0.3713 | ambiguous | -1.666 | Destabilizing | 0.824 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/I | 0.1946 | likely_benign | 0.1904 | benign | -0.039 | Destabilizing | 0.317 | N | 0.735 | prob.delet. | None | None | None | None | N |
T/K | 0.2797 | likely_benign | 0.3565 | ambiguous | -0.277 | Destabilizing | 0.081 | N | 0.725 | prob.delet. | None | None | None | None | N |
T/L | 0.1461 | likely_benign | 0.169 | benign | -0.039 | Destabilizing | 0.081 | N | 0.713 | prob.delet. | None | None | None | None | N |
T/M | 0.1314 | likely_benign | 0.1294 | benign | -0.039 | Destabilizing | 0.935 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/N | 0.1645 | likely_benign | 0.2509 | benign | -1.022 | Destabilizing | 0.062 | N | 0.691 | prob.neutral | None | None | None | None | N |
T/P | 0.7083 | likely_pathogenic | 0.8531 | pathogenic | -0.382 | Destabilizing | 0.001 | N | 0.577 | neutral | None | None | None | None | N |
T/Q | 0.2848 | likely_benign | 0.352 | ambiguous | -0.78 | Destabilizing | 0.38 | N | 0.712 | prob.delet. | None | None | None | None | N |
T/R | 0.1926 | likely_benign | 0.2417 | benign | -0.561 | Destabilizing | 0.38 | N | 0.713 | prob.delet. | None | None | None | None | N |
T/S | 0.1163 | likely_benign | 0.1568 | benign | -1.267 | Destabilizing | None | N | 0.271 | neutral | None | None | None | None | N |
T/V | 0.1676 | likely_benign | 0.1729 | benign | -0.382 | Destabilizing | 0.149 | N | 0.685 | prob.neutral | None | None | None | None | N |
T/W | 0.6976 | likely_pathogenic | 0.7621 | pathogenic | -0.998 | Destabilizing | 0.935 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/Y | 0.3244 | likely_benign | 0.433 | ambiguous | -0.602 | Destabilizing | 0.235 | N | 0.714 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.