Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9470 | 28633;28634;28635 | chr2:178710689;178710688;178710687 | chr2:179575416;179575415;179575414 |
N2AB | 9153 | 27682;27683;27684 | chr2:178710689;178710688;178710687 | chr2:179575416;179575415;179575414 |
N2A | 8226 | 24901;24902;24903 | chr2:178710689;178710688;178710687 | chr2:179575416;179575415;179575414 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs781236320 | -0.38 | 0.873 | None | 0.504 | 0.374 | 0.503744809241 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2474 | likely_benign | 0.3607 | ambiguous | -1.816 | Destabilizing | 0.036 | N | 0.393 | neutral | None | None | None | None | N |
Y/C | 0.1288 | likely_benign | 0.1485 | benign | -0.481 | Destabilizing | 0.873 | D | 0.504 | neutral | None | None | None | None | N |
Y/D | 0.1821 | likely_benign | 0.2396 | benign | 0.307 | Stabilizing | 0.061 | N | 0.447 | neutral | None | None | None | None | N |
Y/E | 0.3896 | ambiguous | 0.49 | ambiguous | 0.354 | Stabilizing | 0.002 | N | 0.417 | neutral | None | None | None | None | N |
Y/F | 0.086 | likely_benign | 0.0917 | benign | -0.827 | Destabilizing | None | N | 0.188 | neutral | None | None | None | None | N |
Y/G | 0.2931 | likely_benign | 0.4604 | ambiguous | -2.087 | Highly Destabilizing | 0.08 | N | 0.449 | neutral | None | None | None | None | N |
Y/H | 0.0843 | likely_benign | 0.1144 | benign | -0.468 | Destabilizing | None | N | 0.142 | neutral | None | None | None | None | N |
Y/I | 0.2436 | likely_benign | 0.3107 | benign | -1.038 | Destabilizing | 0.174 | N | 0.495 | neutral | None | None | None | None | N |
Y/K | 0.3453 | ambiguous | 0.5163 | ambiguous | -0.435 | Destabilizing | 0.002 | N | 0.4 | neutral | None | None | None | None | N |
Y/L | 0.2303 | likely_benign | 0.3352 | benign | -1.038 | Destabilizing | 0.08 | N | 0.364 | neutral | None | None | None | None | N |
Y/M | 0.3694 | ambiguous | 0.4836 | ambiguous | -0.663 | Destabilizing | 0.749 | D | 0.486 | neutral | None | None | None | None | N |
Y/N | 0.0895 | likely_benign | 0.1277 | benign | -0.565 | Destabilizing | 0.061 | N | 0.457 | neutral | None | None | None | None | N |
Y/P | 0.9404 | likely_pathogenic | 0.9714 | pathogenic | -1.286 | Destabilizing | 0.46 | N | 0.534 | neutral | None | None | None | None | N |
Y/Q | 0.2216 | likely_benign | 0.3474 | ambiguous | -0.573 | Destabilizing | 0.007 | N | 0.242 | neutral | None | None | None | None | N |
Y/R | 0.2048 | likely_benign | 0.3207 | benign | 0.031 | Stabilizing | 0.08 | N | 0.454 | neutral | None | None | None | None | N |
Y/S | 0.0804 | likely_benign | 0.111 | benign | -1.241 | Destabilizing | 0.002 | N | 0.397 | neutral | None | None | None | None | N |
Y/T | 0.157 | likely_benign | 0.2172 | benign | -1.105 | Destabilizing | 0.08 | N | 0.453 | neutral | None | None | None | None | N |
Y/V | 0.1953 | likely_benign | 0.2392 | benign | -1.286 | Destabilizing | 0.148 | N | 0.403 | neutral | None | None | None | None | N |
Y/W | 0.3577 | ambiguous | 0.4471 | ambiguous | -0.491 | Destabilizing | 0.901 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.