Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9483 | 28672;28673;28674 | chr2:178710650;178710649;178710648 | chr2:179575377;179575376;179575375 |
N2AB | 9166 | 27721;27722;27723 | chr2:178710650;178710649;178710648 | chr2:179575377;179575376;179575375 |
N2A | 8239 | 24940;24941;24942 | chr2:178710650;178710649;178710648 | chr2:179575377;179575376;179575375 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.326 | None | 0.366 | 0.139 | 0.24896430686 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1834 | likely_benign | 0.2063 | benign | -0.739 | Destabilizing | 0.209 | N | 0.311 | neutral | None | None | None | None | N |
Q/C | 0.7293 | likely_pathogenic | 0.7537 | pathogenic | -0.163 | Destabilizing | 0.991 | D | 0.559 | neutral | None | None | None | None | N |
Q/D | 0.297 | likely_benign | 0.3338 | benign | -0.768 | Destabilizing | 0.002 | N | 0.159 | neutral | None | None | None | None | N |
Q/E | 0.0992 | likely_benign | 0.0865 | benign | -0.641 | Destabilizing | 0.005 | N | 0.127 | neutral | None | None | None | None | N |
Q/F | 0.5189 | ambiguous | 0.5685 | pathogenic | -0.417 | Destabilizing | 0.901 | D | 0.578 | neutral | None | None | None | None | N |
Q/G | 0.2833 | likely_benign | 0.3478 | ambiguous | -1.119 | Destabilizing | 0.345 | N | 0.427 | neutral | None | None | None | None | N |
Q/H | 0.1721 | likely_benign | 0.1922 | benign | -0.932 | Destabilizing | 0.873 | D | 0.503 | neutral | None | None | None | None | N |
Q/I | 0.2876 | likely_benign | 0.2904 | benign | 0.243 | Stabilizing | 0.39 | N | 0.569 | neutral | None | None | None | None | N |
Q/K | 0.1036 | likely_benign | 0.1062 | benign | -0.334 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | N |
Q/L | 0.1323 | likely_benign | 0.1231 | benign | 0.243 | Stabilizing | 0.166 | N | 0.44 | neutral | None | None | None | None | N |
Q/M | 0.3103 | likely_benign | 0.3214 | benign | 0.673 | Stabilizing | 0.901 | D | 0.509 | neutral | None | None | None | None | N |
Q/N | 0.2154 | likely_benign | 0.2452 | benign | -1.007 | Destabilizing | 0.017 | N | 0.163 | neutral | None | None | None | None | N |
Q/P | 0.1333 | likely_benign | 0.1554 | benign | -0.053 | Destabilizing | 0.003 | N | 0.213 | neutral | None | None | None | None | N |
Q/R | 0.1186 | likely_benign | 0.1265 | benign | -0.304 | Destabilizing | 0.326 | N | 0.366 | neutral | None | None | None | None | N |
Q/S | 0.1704 | likely_benign | 0.2259 | benign | -1.125 | Destabilizing | 0.345 | N | 0.303 | neutral | None | None | None | None | N |
Q/T | 0.154 | likely_benign | 0.1776 | benign | -0.791 | Destabilizing | 0.345 | N | 0.399 | neutral | None | None | None | None | N |
Q/V | 0.1997 | likely_benign | 0.2011 | benign | -0.053 | Destabilizing | 0.017 | N | 0.31 | neutral | None | None | None | None | N |
Q/W | 0.4916 | ambiguous | 0.5366 | ambiguous | -0.282 | Destabilizing | 0.991 | D | 0.574 | neutral | None | None | None | None | N |
Q/Y | 0.3824 | ambiguous | 0.4218 | ambiguous | -0.032 | Destabilizing | 0.965 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.