Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9504 | 28735;28736;28737 | chr2:178709809;178709808;178709807 | chr2:179574536;179574535;179574534 |
N2AB | 9187 | 27784;27785;27786 | chr2:178709809;178709808;178709807 | chr2:179574536;179574535;179574534 |
N2A | 8260 | 25003;25004;25005 | chr2:178709809;178709808;178709807 | chr2:179574536;179574535;179574534 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.998 | None | 0.598 | 0.46 | 0.544082543865 | gnomAD-4.0.0 | 1.59189E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2773 | likely_benign | 0.2093 | benign | -0.457 | Destabilizing | 0.989 | D | 0.562 | neutral | None | None | None | None | N |
E/C | 0.9551 | likely_pathogenic | 0.9291 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/D | 0.3809 | ambiguous | 0.3021 | benign | -0.514 | Destabilizing | 0.998 | D | 0.479 | neutral | None | None | None | None | N |
E/F | 0.9066 | likely_pathogenic | 0.8437 | pathogenic | -0.204 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/G | 0.4076 | ambiguous | 0.2829 | benign | -0.686 | Destabilizing | 0.998 | D | 0.598 | neutral | None | None | None | None | N |
E/H | 0.7987 | likely_pathogenic | 0.7019 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/I | 0.5252 | ambiguous | 0.4094 | ambiguous | 0.123 | Stabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/K | 0.3474 | ambiguous | 0.2275 | benign | 0.221 | Stabilizing | 0.994 | D | 0.547 | neutral | None | None | None | None | N |
E/L | 0.6105 | likely_pathogenic | 0.4818 | ambiguous | 0.123 | Stabilizing | 0.983 | D | 0.583 | neutral | None | None | None | None | N |
E/M | 0.6247 | likely_pathogenic | 0.5204 | ambiguous | 0.2 | Stabilizing | 0.96 | D | 0.436 | neutral | None | None | None | None | N |
E/N | 0.589 | likely_pathogenic | 0.4754 | ambiguous | -0.214 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/P | 0.9222 | likely_pathogenic | 0.8702 | pathogenic | -0.05 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/Q | 0.2538 | likely_benign | 0.1995 | benign | -0.165 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
E/R | 0.5219 | ambiguous | 0.3776 | ambiguous | 0.48 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/S | 0.3876 | ambiguous | 0.3015 | benign | -0.365 | Destabilizing | 0.996 | D | 0.584 | neutral | None | None | None | None | N |
E/T | 0.3331 | likely_benign | 0.2535 | benign | -0.177 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
E/V | 0.2986 | likely_benign | 0.2209 | benign | -0.05 | Destabilizing | 0.978 | D | 0.565 | neutral | None | None | None | None | N |
E/W | 0.9695 | likely_pathogenic | 0.9401 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/Y | 0.8676 | likely_pathogenic | 0.7898 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.