Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9537 | 28834;28835;28836 | chr2:178709710;178709709;178709708 | chr2:179574437;179574436;179574435 |
N2AB | 9220 | 27883;27884;27885 | chr2:178709710;178709709;178709708 | chr2:179574437;179574436;179574435 |
N2A | 8293 | 25102;25103;25104 | chr2:178709710;178709709;178709708 | chr2:179574437;179574436;179574435 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.627 | None | 0.333 | 0.101 | 0.311387274539 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0817 | likely_benign | 0.0817 | benign | -0.303 | Destabilizing | 0.041 | N | 0.196 | neutral | None | None | None | None | N |
T/C | 0.4666 | ambiguous | 0.4441 | ambiguous | -0.174 | Destabilizing | 0.944 | D | 0.275 | neutral | None | None | None | None | N |
T/D | 0.2559 | likely_benign | 0.2234 | benign | -0.02 | Destabilizing | 0.388 | N | 0.296 | neutral | None | None | None | None | N |
T/E | 0.3517 | ambiguous | 0.3148 | benign | -0.112 | Destabilizing | 0.241 | N | 0.288 | neutral | None | None | None | None | N |
T/F | 0.3202 | likely_benign | 0.2678 | benign | -0.906 | Destabilizing | 0.818 | D | 0.349 | neutral | None | None | None | None | N |
T/G | 0.1558 | likely_benign | 0.1553 | benign | -0.396 | Destabilizing | 0.001 | N | 0.162 | neutral | None | None | None | None | N |
T/H | 0.289 | likely_benign | 0.2497 | benign | -0.722 | Destabilizing | 0.818 | D | 0.321 | neutral | None | None | None | None | N |
T/I | 0.3075 | likely_benign | 0.2499 | benign | -0.178 | Destabilizing | 0.627 | D | 0.333 | neutral | None | None | None | None | N |
T/K | 0.3192 | likely_benign | 0.2646 | benign | -0.341 | Destabilizing | 0.241 | N | 0.287 | neutral | None | None | None | None | N |
T/L | 0.1472 | likely_benign | 0.1329 | benign | -0.178 | Destabilizing | 0.388 | N | 0.297 | neutral | None | None | None | None | N |
T/M | 0.1487 | likely_benign | 0.1291 | benign | 0.04 | Stabilizing | 0.932 | D | 0.275 | neutral | None | None | None | None | N |
T/N | 0.0992 | likely_benign | 0.0969 | benign | -0.074 | Destabilizing | 0.193 | N | 0.245 | neutral | None | None | None | None | N |
T/P | 0.384 | ambiguous | 0.3576 | ambiguous | -0.193 | Destabilizing | 0.492 | N | 0.324 | neutral | None | None | None | None | N |
T/Q | 0.2933 | likely_benign | 0.2602 | benign | -0.329 | Destabilizing | 0.69 | D | 0.319 | neutral | None | None | None | None | N |
T/R | 0.2517 | likely_benign | 0.2037 | benign | -0.061 | Destabilizing | 0.388 | N | 0.343 | neutral | None | None | None | None | N |
T/S | 0.0703 | likely_benign | 0.0737 | benign | -0.235 | Destabilizing | None | N | 0.105 | neutral | None | None | None | None | N |
T/V | 0.2085 | likely_benign | 0.1817 | benign | -0.193 | Destabilizing | 0.388 | N | 0.228 | neutral | None | None | None | None | N |
T/W | 0.7512 | likely_pathogenic | 0.6616 | pathogenic | -0.947 | Destabilizing | 0.981 | D | 0.337 | neutral | None | None | None | None | N |
T/Y | 0.3888 | ambiguous | 0.327 | benign | -0.649 | Destabilizing | 0.818 | D | 0.337 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.