Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 954 | 3085;3086;3087 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
N2AB | 954 | 3085;3086;3087 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
N2A | 954 | 3085;3086;3087 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
N2B | 908 | 2947;2948;2949 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
Novex-1 | 908 | 2947;2948;2949 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
Novex-2 | 908 | 2947;2948;2949 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
Novex-3 | 954 | 3085;3086;3087 | chr2:178783046;178783045;178783044 | chr2:179647773;179647772;179647771 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | D | 0.677 | 0.767 | 0.9214070867 | gnomAD-4.0.0 | 1.5906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85667E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7523 | likely_pathogenic | 0.7501 | pathogenic | -1.825 | Destabilizing | 0.999 | D | 0.447 | neutral | N | 0.492426001 | None | None | N |
V/C | 0.9772 | likely_pathogenic | 0.9734 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
V/D | 0.9953 | likely_pathogenic | 0.9959 | pathogenic | -1.984 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | D | 0.763862971 | None | None | N |
V/E | 0.9745 | likely_pathogenic | 0.9757 | pathogenic | -1.926 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
V/F | 0.9435 | likely_pathogenic | 0.9412 | pathogenic | -1.283 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | D | 0.5992337679999999 | None | None | N |
V/G | 0.9141 | likely_pathogenic | 0.9165 | pathogenic | -2.203 | Highly Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.603553618 | None | None | N |
V/H | 0.9957 | likely_pathogenic | 0.9954 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
V/I | 0.2153 | likely_benign | 0.221 | benign | -0.851 | Destabilizing | 0.997 | D | 0.47 | neutral | N | 0.515885699 | None | None | N |
V/K | 0.9695 | likely_pathogenic | 0.9703 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
V/L | 0.8594 | likely_pathogenic | 0.8532 | pathogenic | -0.851 | Destabilizing | 0.997 | D | 0.483 | neutral | D | 0.523217805 | None | None | N |
V/M | 0.7666 | likely_pathogenic | 0.7594 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/N | 0.9867 | likely_pathogenic | 0.9866 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/P | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
V/Q | 0.9696 | likely_pathogenic | 0.9696 | pathogenic | -1.6 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
V/R | 0.9564 | likely_pathogenic | 0.9564 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
V/S | 0.9311 | likely_pathogenic | 0.931 | pathogenic | -2.04 | Highly Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
V/T | 0.7732 | likely_pathogenic | 0.7685 | pathogenic | -1.87 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
V/W | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -1.547 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
V/Y | 0.9952 | likely_pathogenic | 0.9949 | pathogenic | -1.246 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.