Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9540 | 28843;28844;28845 | chr2:178709701;178709700;178709699 | chr2:179574428;179574427;179574426 |
N2AB | 9223 | 27892;27893;27894 | chr2:178709701;178709700;178709699 | chr2:179574428;179574427;179574426 |
N2A | 8296 | 25111;25112;25113 | chr2:178709701;178709700;178709699 | chr2:179574428;179574427;179574426 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/W | None | None | 0.927 | None | 0.597 | 0.418 | 0.730682531328 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
C/Y | rs1427971848 | None | 0.001 | None | 0.415 | 0.23 | 0.475034548194 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.359 | ambiguous | 0.3189 | benign | -1.647 | Destabilizing | 0.495 | N | 0.382 | neutral | None | None | None | None | N |
C/D | 0.7461 | likely_pathogenic | 0.6783 | pathogenic | -0.885 | Destabilizing | 0.543 | D | 0.607 | neutral | None | None | None | None | N |
C/E | 0.7851 | likely_pathogenic | 0.7398 | pathogenic | -0.757 | Destabilizing | 0.704 | D | 0.603 | neutral | None | None | None | None | N |
C/F | 0.1799 | likely_benign | 0.183 | benign | -1.094 | Destabilizing | 0.473 | N | 0.547 | neutral | None | None | None | None | N |
C/G | 0.2366 | likely_benign | 0.1943 | benign | -1.97 | Destabilizing | 0.473 | N | 0.57 | neutral | None | None | None | None | N |
C/H | 0.4259 | ambiguous | 0.4083 | ambiguous | -2.208 | Highly Destabilizing | 0.893 | D | 0.645 | neutral | None | None | None | None | N |
C/I | 0.3321 | likely_benign | 0.3284 | benign | -0.815 | Destabilizing | 0.704 | D | 0.557 | neutral | None | None | None | None | N |
C/K | 0.774 | likely_pathogenic | 0.7348 | pathogenic | -1.119 | Destabilizing | 0.704 | D | 0.606 | neutral | None | None | None | None | N |
C/L | 0.3714 | ambiguous | 0.3472 | ambiguous | -0.815 | Destabilizing | 0.329 | N | 0.475 | neutral | None | None | None | None | N |
C/M | 0.4947 | ambiguous | 0.5012 | ambiguous | 0.038 | Stabilizing | 0.981 | D | 0.613 | neutral | None | None | None | None | N |
C/N | 0.4454 | ambiguous | 0.4382 | ambiguous | -1.224 | Destabilizing | 0.007 | N | 0.481 | neutral | None | None | None | None | N |
C/P | 0.9818 | likely_pathogenic | 0.9701 | pathogenic | -1.066 | Destabilizing | 0.981 | D | 0.633 | neutral | None | None | None | None | N |
C/Q | 0.5894 | likely_pathogenic | 0.5482 | ambiguous | -1.083 | Destabilizing | 0.944 | D | 0.632 | neutral | None | None | None | None | N |
C/R | 0.4247 | ambiguous | 0.3642 | ambiguous | -1.136 | Destabilizing | 0.863 | D | 0.635 | neutral | None | None | None | None | N |
C/S | 0.2367 | likely_benign | 0.2113 | benign | -1.67 | Destabilizing | 0.27 | N | 0.512 | neutral | None | None | None | None | N |
C/T | 0.2612 | likely_benign | 0.2402 | benign | -1.36 | Destabilizing | 0.704 | D | 0.528 | neutral | None | None | None | None | N |
C/V | 0.2969 | likely_benign | 0.2851 | benign | -1.066 | Destabilizing | 0.704 | D | 0.533 | neutral | None | None | None | None | N |
C/W | 0.405 | ambiguous | 0.3663 | ambiguous | -1.217 | Destabilizing | 0.927 | D | 0.597 | neutral | None | None | None | None | N |
C/Y | 0.1767 | likely_benign | 0.1792 | benign | -1.124 | Destabilizing | 0.001 | N | 0.415 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.