Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9541 | 28846;28847;28848 | chr2:178709698;178709697;178709696 | chr2:179574425;179574424;179574423 |
N2AB | 9224 | 27895;27896;27897 | chr2:178709698;178709697;178709696 | chr2:179574425;179574424;179574423 |
N2A | 8297 | 25114;25115;25116 | chr2:178709698;178709697;178709696 | chr2:179574425;179574424;179574423 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2076382239 | None | 0.005 | None | 0.117 | 0.247 | 0.303453137403 | gnomAD-4.0.0 | 1.5911E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2085 | likely_benign | 0.1809 | benign | -0.62 | Destabilizing | 0.801 | D | 0.408 | neutral | None | None | None | None | N |
E/C | 0.8709 | likely_pathogenic | 0.8445 | pathogenic | -0.217 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
E/D | 0.1054 | likely_benign | 0.095 | benign | -1.018 | Destabilizing | 0.005 | N | 0.109 | neutral | None | None | None | None | N |
E/F | 0.7359 | likely_pathogenic | 0.6899 | pathogenic | -0.499 | Destabilizing | 0.991 | D | 0.58 | neutral | None | None | None | None | N |
E/G | 0.2851 | likely_benign | 0.222 | benign | -0.931 | Destabilizing | 0.801 | D | 0.473 | neutral | None | None | None | None | N |
E/H | 0.4419 | ambiguous | 0.396 | ambiguous | -0.862 | Destabilizing | 0.991 | D | 0.431 | neutral | None | None | None | None | N |
E/I | 0.3362 | likely_benign | 0.306 | benign | 0.204 | Stabilizing | 0.974 | D | 0.577 | neutral | None | None | None | None | N |
E/K | 0.2014 | likely_benign | 0.163 | benign | -0.262 | Destabilizing | 0.005 | N | 0.117 | neutral | None | None | None | None | N |
E/L | 0.4176 | ambiguous | 0.3769 | ambiguous | 0.204 | Stabilizing | 0.949 | D | 0.52 | neutral | None | None | None | None | N |
E/M | 0.4706 | ambiguous | 0.4248 | ambiguous | 0.611 | Stabilizing | 0.998 | D | 0.57 | neutral | None | None | None | None | N |
E/N | 0.2178 | likely_benign | 0.1903 | benign | -0.592 | Destabilizing | 0.842 | D | 0.384 | neutral | None | None | None | None | N |
E/P | 0.9499 | likely_pathogenic | 0.9104 | pathogenic | -0.049 | Destabilizing | 0.974 | D | 0.481 | neutral | None | None | None | None | N |
E/Q | 0.1656 | likely_benign | 0.1483 | benign | -0.516 | Destabilizing | 0.801 | D | 0.406 | neutral | None | None | None | None | N |
E/R | 0.3413 | ambiguous | 0.2822 | benign | -0.203 | Destabilizing | 0.728 | D | 0.384 | neutral | None | None | None | None | N |
E/S | 0.2088 | likely_benign | 0.1827 | benign | -0.859 | Destabilizing | 0.842 | D | 0.333 | neutral | None | None | None | None | N |
E/T | 0.2269 | likely_benign | 0.2095 | benign | -0.602 | Destabilizing | 0.842 | D | 0.46 | neutral | None | None | None | None | N |
E/V | 0.227 | likely_benign | 0.2029 | benign | -0.049 | Destabilizing | 0.966 | D | 0.513 | neutral | None | None | None | None | N |
E/W | 0.9219 | likely_pathogenic | 0.886 | pathogenic | -0.384 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
E/Y | 0.6415 | likely_pathogenic | 0.5719 | pathogenic | -0.261 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.