Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9553 | 28882;28883;28884 | chr2:178709662;178709661;178709660 | chr2:179574389;179574388;179574387 |
N2AB | 9236 | 27931;27932;27933 | chr2:178709662;178709661;178709660 | chr2:179574389;179574388;179574387 |
N2A | 8309 | 25150;25151;25152 | chr2:178709662;178709661;178709660 | chr2:179574389;179574388;179574387 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs763879363 | None | None | None | 0.256 | 0.064 | 0.202949470691 | gnomAD-4.0.0 | 2.7367E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59778E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5485 | ambiguous | 0.5041 | ambiguous | -1.941 | Destabilizing | 0.052 | N | 0.639 | neutral | None | None | None | None | N |
V/C | 0.7984 | likely_pathogenic | 0.8031 | pathogenic | -1.587 | Destabilizing | 0.935 | D | 0.817 | deleterious | None | None | None | None | N |
V/D | 0.9035 | likely_pathogenic | 0.8807 | pathogenic | -2.506 | Highly Destabilizing | 0.484 | N | 0.873 | deleterious | None | None | None | None | N |
V/E | 0.8216 | likely_pathogenic | 0.7905 | pathogenic | -2.424 | Highly Destabilizing | 0.555 | D | 0.841 | deleterious | None | None | None | None | N |
V/F | 0.2675 | likely_benign | 0.2137 | benign | -1.406 | Destabilizing | 0.317 | N | 0.772 | deleterious | None | None | None | None | N |
V/G | 0.602 | likely_pathogenic | 0.5796 | pathogenic | -2.353 | Highly Destabilizing | 0.484 | N | 0.826 | deleterious | None | None | None | None | N |
V/H | 0.8629 | likely_pathogenic | 0.8355 | pathogenic | -1.969 | Destabilizing | 0.935 | D | 0.881 | deleterious | None | None | None | None | N |
V/I | 0.0766 | likely_benign | 0.0673 | benign | -0.851 | Destabilizing | None | N | 0.256 | neutral | None | None | None | None | N |
V/K | 0.8131 | likely_pathogenic | 0.7806 | pathogenic | -1.62 | Destabilizing | 0.555 | D | 0.843 | deleterious | None | None | None | None | N |
V/L | 0.2471 | likely_benign | 0.2059 | benign | -0.851 | Destabilizing | 0.004 | N | 0.359 | neutral | None | None | None | None | N |
V/M | 0.2281 | likely_benign | 0.196 | benign | -0.737 | Destabilizing | 0.38 | N | 0.686 | prob.neutral | None | None | None | None | N |
V/N | 0.7273 | likely_pathogenic | 0.6913 | pathogenic | -1.658 | Destabilizing | 0.791 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9746 | likely_pathogenic | 0.9629 | pathogenic | -1.184 | Destabilizing | 0.791 | D | 0.871 | deleterious | None | None | None | None | N |
V/Q | 0.7745 | likely_pathogenic | 0.7485 | pathogenic | -1.742 | Destabilizing | 0.791 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.7618 | likely_pathogenic | 0.7291 | pathogenic | -1.178 | Destabilizing | 0.555 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.6688 | likely_pathogenic | 0.6371 | pathogenic | -2.204 | Highly Destabilizing | 0.555 | D | 0.817 | deleterious | None | None | None | None | N |
V/T | 0.6137 | likely_pathogenic | 0.5719 | pathogenic | -2.005 | Highly Destabilizing | 0.149 | N | 0.642 | neutral | None | None | None | None | N |
V/W | 0.9082 | likely_pathogenic | 0.8791 | pathogenic | -1.768 | Destabilizing | 0.935 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.7199 | likely_pathogenic | 0.6764 | pathogenic | -1.456 | Destabilizing | 0.555 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.