Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9567 | 28924;28925;28926 | chr2:178709620;178709619;178709618 | chr2:179574347;179574346;179574345 |
N2AB | 9250 | 27973;27974;27975 | chr2:178709620;178709619;178709618 | chr2:179574347;179574346;179574345 |
N2A | 8323 | 25192;25193;25194 | chr2:178709620;178709619;178709618 | chr2:179574347;179574346;179574345 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2076366428 | None | 0.998 | None | 0.637 | 0.315 | 0.236890367714 | gnomAD-4.0.0 | 3.42098E-06 | None | None | None | None | N | None | 1.49361E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs770062038 | -1.102 | 0.998 | None | 0.707 | 0.439 | 0.496957384516 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7244 | likely_pathogenic | 0.7681 | pathogenic | -0.988 | Destabilizing | 0.992 | D | 0.597 | neutral | None | None | None | None | N |
K/C | 0.8826 | likely_pathogenic | 0.8913 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/D | 0.9388 | likely_pathogenic | 0.955 | pathogenic | -0.307 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/E | 0.4557 | ambiguous | 0.4965 | ambiguous | -0.142 | Destabilizing | 0.978 | D | 0.519 | neutral | None | None | None | None | N |
K/F | 0.9439 | likely_pathogenic | 0.952 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
K/G | 0.8889 | likely_pathogenic | 0.9053 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
K/H | 0.5399 | ambiguous | 0.5814 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/I | 0.6167 | likely_pathogenic | 0.6256 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
K/L | 0.6362 | likely_pathogenic | 0.6631 | pathogenic | 0.071 | Stabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
K/M | 0.4464 | ambiguous | 0.4695 | ambiguous | -0.09 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/N | 0.8167 | likely_pathogenic | 0.8557 | pathogenic | -0.784 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
K/P | 0.994 | likely_pathogenic | 0.9962 | pathogenic | -0.254 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/Q | 0.2636 | likely_benign | 0.2781 | benign | -0.795 | Destabilizing | 0.775 | D | 0.367 | neutral | None | None | None | None | N |
K/R | 0.1027 | likely_benign | 0.1031 | benign | -0.646 | Destabilizing | 0.989 | D | 0.491 | neutral | None | None | None | None | N |
K/S | 0.7759 | likely_pathogenic | 0.8181 | pathogenic | -1.556 | Destabilizing | 0.992 | D | 0.567 | neutral | None | None | None | None | N |
K/T | 0.4419 | ambiguous | 0.4799 | ambiguous | -1.158 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/V | 0.5663 | likely_pathogenic | 0.5767 | pathogenic | -0.254 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/W | 0.9409 | likely_pathogenic | 0.9417 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/Y | 0.8674 | likely_pathogenic | 0.8881 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.