Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9600 | 29023;29024;29025 | chr2:178707769;178707768;178707767 | chr2:179572496;179572495;179572494 |
N2AB | 9283 | 28072;28073;28074 | chr2:178707769;178707768;178707767 | chr2:179572496;179572495;179572494 |
N2A | 8356 | 25291;25292;25293 | chr2:178707769;178707768;178707767 | chr2:179572496;179572495;179572494 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.901 | None | 0.499 | 0.338 | 0.527356302626 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86041E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0949 | likely_benign | 0.0878 | benign | -0.397 | Destabilizing | 0.008 | N | 0.144 | neutral | None | None | None | None | N |
T/C | 0.5757 | likely_pathogenic | 0.5338 | ambiguous | -0.371 | Destabilizing | 0.996 | D | 0.513 | neutral | None | None | None | None | N |
T/D | 0.4144 | ambiguous | 0.3692 | ambiguous | 0.247 | Stabilizing | 0.923 | D | 0.454 | neutral | None | None | None | None | N |
T/E | 0.3151 | likely_benign | 0.271 | benign | 0.203 | Stabilizing | 0.775 | D | 0.451 | neutral | None | None | None | None | N |
T/F | 0.2713 | likely_benign | 0.2232 | benign | -0.736 | Destabilizing | 0.961 | D | 0.594 | neutral | None | None | None | None | N |
T/G | 0.3553 | ambiguous | 0.3133 | benign | -0.576 | Destabilizing | 0.633 | D | 0.464 | neutral | None | None | None | None | N |
T/H | 0.3182 | likely_benign | 0.2667 | benign | -0.828 | Destabilizing | 0.989 | D | 0.573 | neutral | None | None | None | None | N |
T/I | 0.1797 | likely_benign | 0.1556 | benign | -0.04 | Destabilizing | 0.901 | D | 0.499 | neutral | None | None | None | None | N |
T/K | 0.2669 | likely_benign | 0.2234 | benign | -0.433 | Destabilizing | 0.565 | D | 0.456 | neutral | None | None | None | None | N |
T/L | 0.123 | likely_benign | 0.1078 | benign | -0.04 | Destabilizing | 0.775 | D | 0.473 | neutral | None | None | None | None | N |
T/M | 0.0981 | likely_benign | 0.0848 | benign | None | Stabilizing | 0.996 | D | 0.499 | neutral | None | None | None | None | N |
T/N | 0.1543 | likely_benign | 0.1384 | benign | -0.314 | Destabilizing | 0.858 | D | 0.443 | neutral | None | None | None | None | N |
T/P | 0.1946 | likely_benign | 0.1806 | benign | -0.128 | Destabilizing | 0.949 | D | 0.498 | neutral | None | None | None | None | N |
T/Q | 0.266 | likely_benign | 0.2289 | benign | -0.471 | Destabilizing | 0.923 | D | 0.502 | neutral | None | None | None | None | N |
T/R | 0.2019 | likely_benign | 0.1663 | benign | -0.199 | Destabilizing | 0.901 | D | 0.497 | neutral | None | None | None | None | N |
T/S | 0.1265 | likely_benign | 0.1163 | benign | -0.546 | Destabilizing | 0.034 | N | 0.14 | neutral | None | None | None | None | N |
T/V | 0.1461 | likely_benign | 0.132 | benign | -0.128 | Destabilizing | 0.633 | D | 0.462 | neutral | None | None | None | None | N |
T/W | 0.6311 | likely_pathogenic | 0.5532 | ambiguous | -0.741 | Destabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | N |
T/Y | 0.357 | ambiguous | 0.3151 | benign | -0.46 | Destabilizing | 0.987 | D | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.