Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9620 | 29083;29084;29085 | chr2:178707709;178707708;178707707 | chr2:179572436;179572435;179572434 |
N2AB | 9303 | 28132;28133;28134 | chr2:178707709;178707708;178707707 | chr2:179572436;179572435;179572434 |
N2A | 8376 | 25351;25352;25353 | chr2:178707709;178707708;178707707 | chr2:179572436;179572435;179572434 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.028 | None | 0.147 | 0.126 | 0.223847106136 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6023 | likely_pathogenic | 0.3763 | ambiguous | -0.137 | Destabilizing | 0.737 | D | 0.36 | neutral | None | None | None | None | I |
R/C | 0.3842 | ambiguous | 0.2229 | benign | -0.327 | Destabilizing | 0.998 | D | 0.423 | neutral | None | None | None | None | I |
R/D | 0.8477 | likely_pathogenic | 0.6723 | pathogenic | -0.073 | Destabilizing | 0.872 | D | 0.495 | neutral | None | None | None | None | I |
R/E | 0.5807 | likely_pathogenic | 0.3758 | ambiguous | -0.013 | Destabilizing | 0.584 | D | 0.39 | neutral | None | None | None | None | I |
R/F | 0.7385 | likely_pathogenic | 0.5809 | pathogenic | -0.374 | Destabilizing | 0.98 | D | 0.448 | neutral | None | None | None | None | I |
R/G | 0.4785 | ambiguous | 0.2658 | benign | -0.325 | Destabilizing | 0.912 | D | 0.456 | neutral | None | None | None | None | I |
R/H | 0.143 | likely_benign | 0.1041 | benign | -0.723 | Destabilizing | 0.98 | D | 0.488 | neutral | None | None | None | None | I |
R/I | 0.4226 | ambiguous | 0.2738 | benign | 0.321 | Stabilizing | 0.083 | N | 0.335 | neutral | None | None | None | None | I |
R/K | 0.1326 | likely_benign | 0.1042 | benign | -0.213 | Destabilizing | 0.028 | N | 0.147 | neutral | None | None | None | None | I |
R/L | 0.405 | ambiguous | 0.2658 | benign | 0.321 | Stabilizing | 0.584 | D | 0.371 | neutral | None | None | None | None | I |
R/M | 0.4546 | ambiguous | 0.2955 | benign | -0.061 | Destabilizing | 0.973 | D | 0.466 | neutral | None | None | None | None | I |
R/N | 0.7437 | likely_pathogenic | 0.535 | ambiguous | 0.015 | Stabilizing | 0.932 | D | 0.427 | neutral | None | None | None | None | I |
R/P | 0.9437 | likely_pathogenic | 0.8512 | pathogenic | 0.188 | Stabilizing | 0.977 | D | 0.527 | neutral | None | None | None | None | I |
R/Q | 0.1545 | likely_benign | 0.1049 | benign | -0.108 | Destabilizing | 0.209 | N | 0.215 | neutral | None | None | None | None | I |
R/S | 0.6457 | likely_pathogenic | 0.4141 | ambiguous | -0.394 | Destabilizing | 0.514 | D | 0.428 | neutral | None | None | None | None | I |
R/T | 0.3461 | ambiguous | 0.193 | benign | -0.201 | Destabilizing | 0.064 | N | 0.239 | neutral | None | None | None | None | I |
R/V | 0.5081 | ambiguous | 0.3383 | benign | 0.188 | Stabilizing | 0.584 | D | 0.407 | neutral | None | None | None | None | I |
R/W | 0.3176 | likely_benign | 0.2052 | benign | -0.394 | Destabilizing | 0.998 | D | 0.433 | neutral | None | None | None | None | I |
R/Y | 0.6132 | likely_pathogenic | 0.4576 | ambiguous | 0.007 | Stabilizing | 0.993 | D | 0.455 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.