Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9621 | 29086;29087;29088 | chr2:178707706;178707705;178707704 | chr2:179572433;179572432;179572431 |
N2AB | 9304 | 28135;28136;28137 | chr2:178707706;178707705;178707704 | chr2:179572433;179572432;179572431 |
N2A | 8377 | 25354;25355;25356 | chr2:178707706;178707705;178707704 | chr2:179572433;179572432;179572431 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.994 | None | 0.856 | 0.785 | 0.909067042513 | gnomAD-4.0.0 | 1.59103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9519 | likely_pathogenic | 0.9294 | pathogenic | -2.14 | Highly Destabilizing | 0.845 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/C | 0.9562 | likely_pathogenic | 0.944 | pathogenic | -1.214 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/D | 0.998 | likely_pathogenic | 0.9962 | pathogenic | -2.084 | Highly Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | N |
I/E | 0.9924 | likely_pathogenic | 0.9877 | pathogenic | -1.89 | Destabilizing | 0.987 | D | 0.862 | deleterious | None | None | None | None | N |
I/F | 0.481 | ambiguous | 0.4081 | ambiguous | -1.259 | Destabilizing | 0.967 | D | 0.723 | prob.delet. | None | None | None | None | N |
I/G | 0.9879 | likely_pathogenic | 0.9806 | pathogenic | -2.64 | Highly Destabilizing | 0.987 | D | 0.855 | deleterious | None | None | None | None | N |
I/H | 0.9863 | likely_pathogenic | 0.9738 | pathogenic | -1.953 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
I/K | 0.9752 | likely_pathogenic | 0.9601 | pathogenic | -1.491 | Destabilizing | 0.987 | D | 0.865 | deleterious | None | None | None | None | N |
I/L | 0.3082 | likely_benign | 0.2778 | benign | -0.721 | Destabilizing | 0.426 | N | 0.475 | neutral | None | None | None | None | N |
I/M | 0.3196 | likely_benign | 0.2831 | benign | -0.562 | Destabilizing | 0.983 | D | 0.686 | prob.neutral | None | None | None | None | N |
I/N | 0.9626 | likely_pathogenic | 0.9362 | pathogenic | -1.7 | Destabilizing | 0.994 | D | 0.856 | deleterious | None | None | None | None | N |
I/P | 0.9801 | likely_pathogenic | 0.9679 | pathogenic | -1.172 | Destabilizing | 0.996 | D | 0.86 | deleterious | None | None | None | None | N |
I/Q | 0.9812 | likely_pathogenic | 0.9678 | pathogenic | -1.616 | Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
I/R | 0.9709 | likely_pathogenic | 0.9515 | pathogenic | -1.204 | Destabilizing | 0.987 | D | 0.861 | deleterious | None | None | None | None | N |
I/S | 0.9583 | likely_pathogenic | 0.9275 | pathogenic | -2.393 | Highly Destabilizing | 0.983 | D | 0.822 | deleterious | None | None | None | None | N |
I/T | 0.9221 | likely_pathogenic | 0.889 | pathogenic | -2.054 | Highly Destabilizing | 0.892 | D | 0.771 | deleterious | None | None | None | None | N |
I/V | 0.1557 | likely_benign | 0.1658 | benign | -1.172 | Destabilizing | 0.011 | N | 0.212 | neutral | None | None | None | None | N |
I/W | 0.9774 | likely_pathogenic | 0.9635 | pathogenic | -1.567 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
I/Y | 0.9199 | likely_pathogenic | 0.8869 | pathogenic | -1.248 | Destabilizing | 0.987 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.