Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9627 | 29104;29105;29106 | chr2:178707688;178707687;178707686 | chr2:179572415;179572414;179572413 |
N2AB | 9310 | 28153;28154;28155 | chr2:178707688;178707687;178707686 | chr2:179572415;179572414;179572413 |
N2A | 8383 | 25372;25373;25374 | chr2:178707688;178707687;178707686 | chr2:179572415;179572414;179572413 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs878908638 | -0.18 | 0.994 | None | 0.381 | 0.475 | 0.31501682445 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
G/D | rs878908638 | -0.18 | 0.994 | None | 0.381 | 0.475 | 0.31501682445 | gnomAD-4.0.0 | 2.73669E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59769E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4283 | ambiguous | 0.3135 | benign | -0.28 | Destabilizing | 0.961 | D | 0.407 | neutral | None | None | None | None | N |
G/C | 0.7535 | likely_pathogenic | 0.6077 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
G/D | 0.6741 | likely_pathogenic | 0.4153 | ambiguous | -0.602 | Destabilizing | 0.994 | D | 0.381 | neutral | None | None | None | None | N |
G/E | 0.6847 | likely_pathogenic | 0.4369 | ambiguous | -0.752 | Destabilizing | 0.97 | D | 0.459 | neutral | None | None | None | None | N |
G/F | 0.9345 | likely_pathogenic | 0.8554 | pathogenic | -0.972 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | N |
G/H | 0.8266 | likely_pathogenic | 0.6728 | pathogenic | -0.348 | Destabilizing | 0.191 | N | 0.382 | neutral | None | None | None | None | N |
G/I | 0.8808 | likely_pathogenic | 0.7463 | pathogenic | -0.48 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
G/K | 0.8313 | likely_pathogenic | 0.6242 | pathogenic | -0.806 | Destabilizing | 0.942 | D | 0.453 | neutral | None | None | None | None | N |
G/L | 0.8753 | likely_pathogenic | 0.7603 | pathogenic | -0.48 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
G/M | 0.8909 | likely_pathogenic | 0.7884 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
G/N | 0.5598 | ambiguous | 0.4085 | ambiguous | -0.527 | Destabilizing | 0.97 | D | 0.393 | neutral | None | None | None | None | N |
G/P | 0.9799 | likely_pathogenic | 0.9576 | pathogenic | -0.386 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | N |
G/Q | 0.6702 | likely_pathogenic | 0.4693 | ambiguous | -0.773 | Destabilizing | 0.991 | D | 0.523 | neutral | None | None | None | None | N |
G/R | 0.6763 | likely_pathogenic | 0.4348 | ambiguous | -0.373 | Destabilizing | 0.031 | N | 0.309 | neutral | None | None | None | None | N |
G/S | 0.1993 | likely_benign | 0.1494 | benign | -0.674 | Destabilizing | 0.98 | D | 0.373 | neutral | None | None | None | None | N |
G/T | 0.5896 | likely_pathogenic | 0.435 | ambiguous | -0.754 | Destabilizing | 0.996 | D | 0.485 | neutral | None | None | None | None | N |
G/V | 0.7648 | likely_pathogenic | 0.585 | pathogenic | -0.386 | Destabilizing | 0.994 | D | 0.608 | neutral | None | None | None | None | N |
G/W | 0.8561 | likely_pathogenic | 0.7182 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
G/Y | 0.8814 | likely_pathogenic | 0.7749 | pathogenic | -0.782 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.