Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9650 | 29173;29174;29175 | chr2:178707619;178707618;178707617 | chr2:179572346;179572345;179572344 |
N2AB | 9333 | 28222;28223;28224 | chr2:178707619;178707618;178707617 | chr2:179572346;179572345;179572344 |
N2A | 8406 | 25441;25442;25443 | chr2:178707619;178707618;178707617 | chr2:179572346;179572345;179572344 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.001 | None | 0.285 | 0.152 | 0.461495907335 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2321 | likely_benign | 0.175 | benign | -0.939 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | N |
R/C | 0.2663 | likely_benign | 0.2014 | benign | -0.829 | Destabilizing | 0.497 | N | 0.365 | neutral | None | None | None | None | N |
R/D | 0.5291 | ambiguous | 0.4167 | ambiguous | 0.035 | Stabilizing | 0.008 | N | 0.343 | neutral | None | None | None | None | N |
R/E | 0.253 | likely_benign | 0.1862 | benign | 0.181 | Stabilizing | 0.002 | N | 0.176 | neutral | None | None | None | None | N |
R/F | 0.4715 | ambiguous | 0.3576 | ambiguous | -0.657 | Destabilizing | 0.085 | N | 0.456 | neutral | None | None | None | None | N |
R/G | 0.1503 | likely_benign | 0.1126 | benign | -1.27 | Destabilizing | 0.001 | N | 0.285 | neutral | None | None | None | None | N |
R/H | 0.1081 | likely_benign | 0.101 | benign | -1.54 | Destabilizing | 0.245 | N | 0.254 | neutral | None | None | None | None | N |
R/I | 0.2289 | likely_benign | 0.1717 | benign | -0.039 | Destabilizing | 0.014 | N | 0.429 | neutral | None | None | None | None | N |
R/K | 0.0609 | likely_benign | 0.0591 | benign | -0.789 | Destabilizing | None | N | 0.093 | neutral | None | None | None | None | N |
R/L | 0.1861 | likely_benign | 0.1438 | benign | -0.039 | Destabilizing | 0.008 | N | 0.307 | neutral | None | None | None | None | N |
R/M | 0.1832 | likely_benign | 0.1464 | benign | -0.414 | Destabilizing | 0.245 | N | 0.342 | neutral | None | None | None | None | N |
R/N | 0.3308 | likely_benign | 0.2732 | benign | -0.296 | Destabilizing | 0.008 | N | 0.175 | neutral | None | None | None | None | N |
R/P | 0.4566 | ambiguous | 0.382 | ambiguous | -0.318 | Destabilizing | 0.037 | N | 0.373 | neutral | None | None | None | None | N |
R/Q | 0.0948 | likely_benign | 0.0822 | benign | -0.423 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
R/S | 0.261 | likely_benign | 0.2 | benign | -1.137 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
R/T | 0.1356 | likely_benign | 0.1062 | benign | -0.793 | Destabilizing | None | N | 0.136 | neutral | None | None | None | None | N |
R/V | 0.3 | likely_benign | 0.2203 | benign | -0.318 | Destabilizing | 0.004 | N | 0.373 | neutral | None | None | None | None | N |
R/W | 0.177 | likely_benign | 0.1351 | benign | -0.263 | Destabilizing | 0.788 | D | 0.341 | neutral | None | None | None | None | N |
R/Y | 0.3859 | ambiguous | 0.2988 | benign | -0.003 | Destabilizing | 0.085 | N | 0.458 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.