Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9652 | 29179;29180;29181 | chr2:178707613;178707612;178707611 | chr2:179572340;179572339;179572338 |
N2AB | 9335 | 28228;28229;28230 | chr2:178707613;178707612;178707611 | chr2:179572340;179572339;179572338 |
N2A | 8408 | 25447;25448;25449 | chr2:178707613;178707612;178707611 | chr2:179572340;179572339;179572338 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.317 | None | 0.549 | 0.252 | 0.468168183122 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1191 | likely_benign | 0.1109 | benign | -1.938 | Destabilizing | None | N | 0.164 | neutral | None | None | None | None | N |
V/C | 0.8239 | likely_pathogenic | 0.8188 | pathogenic | -1.747 | Destabilizing | 0.824 | D | 0.559 | neutral | None | None | None | None | N |
V/D | 0.8651 | likely_pathogenic | 0.8405 | pathogenic | -2.492 | Highly Destabilizing | 0.38 | N | 0.629 | neutral | None | None | None | None | N |
V/E | 0.826 | likely_pathogenic | 0.7957 | pathogenic | -2.424 | Highly Destabilizing | 0.317 | N | 0.6 | neutral | None | None | None | None | N |
V/F | 0.5478 | ambiguous | 0.4937 | ambiguous | -1.418 | Destabilizing | 0.38 | N | 0.621 | neutral | None | None | None | None | N |
V/G | 0.3287 | likely_benign | 0.3036 | benign | -2.321 | Highly Destabilizing | 0.062 | N | 0.565 | neutral | None | None | None | None | N |
V/H | 0.9404 | likely_pathogenic | 0.9241 | pathogenic | -1.779 | Destabilizing | 0.935 | D | 0.567 | neutral | None | None | None | None | N |
V/I | 0.122 | likely_benign | 0.0991 | benign | -0.936 | Destabilizing | None | N | 0.167 | neutral | None | None | None | None | N |
V/K | 0.8539 | likely_pathogenic | 0.8355 | pathogenic | -1.574 | Destabilizing | 0.149 | N | 0.598 | neutral | None | None | None | None | N |
V/L | 0.4101 | ambiguous | 0.3379 | benign | -0.936 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
V/M | 0.3392 | likely_benign | 0.2472 | benign | -0.95 | Destabilizing | 0.317 | N | 0.549 | neutral | None | None | None | None | N |
V/N | 0.6762 | likely_pathogenic | 0.6685 | pathogenic | -1.625 | Destabilizing | 0.38 | N | 0.628 | neutral | None | None | None | None | N |
V/P | 0.7097 | likely_pathogenic | 0.6765 | pathogenic | -1.24 | Destabilizing | 0.38 | N | 0.609 | neutral | None | None | None | None | N |
V/Q | 0.8274 | likely_pathogenic | 0.8049 | pathogenic | -1.759 | Destabilizing | 0.555 | D | 0.613 | neutral | None | None | None | None | N |
V/R | 0.7882 | likely_pathogenic | 0.7807 | pathogenic | -1.096 | Destabilizing | 0.38 | N | 0.626 | neutral | None | None | None | None | N |
V/S | 0.3009 | likely_benign | 0.3071 | benign | -2.176 | Highly Destabilizing | 0.081 | N | 0.513 | neutral | None | None | None | None | N |
V/T | 0.1425 | likely_benign | 0.1465 | benign | -1.993 | Destabilizing | 0.001 | N | 0.301 | neutral | None | None | None | None | N |
V/W | 0.9807 | likely_pathogenic | 0.9672 | pathogenic | -1.682 | Destabilizing | 0.935 | D | 0.575 | neutral | None | None | None | None | N |
V/Y | 0.9225 | likely_pathogenic | 0.908 | pathogenic | -1.381 | Destabilizing | 0.555 | D | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.