Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9661 | 29206;29207;29208 | chr2:178707586;178707585;178707584 | chr2:179572313;179572312;179572311 |
N2AB | 9344 | 28255;28256;28257 | chr2:178707586;178707585;178707584 | chr2:179572313;179572312;179572311 |
N2A | 8417 | 25474;25475;25476 | chr2:178707586;178707585;178707584 | chr2:179572313;179572312;179572311 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.472 | None | 0.567 | 0.142 | 0.406531046227 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2998 | likely_benign | 0.2495 | benign | -1.461 | Destabilizing | 0.472 | N | 0.567 | neutral | None | None | None | None | N |
V/C | 0.8593 | likely_pathogenic | 0.8182 | pathogenic | -0.924 | Destabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | N |
V/D | 0.7264 | likely_pathogenic | 0.6036 | pathogenic | -1.768 | Destabilizing | 0.953 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/E | 0.5237 | ambiguous | 0.3972 | ambiguous | -1.524 | Destabilizing | 0.939 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/F | 0.2212 | likely_benign | 0.1957 | benign | -0.729 | Destabilizing | 0.009 | N | 0.554 | neutral | None | None | None | None | N |
V/G | 0.4534 | ambiguous | 0.3699 | ambiguous | -2.021 | Highly Destabilizing | 0.815 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/H | 0.7572 | likely_pathogenic | 0.664 | pathogenic | -1.905 | Destabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/I | 0.0793 | likely_benign | 0.0809 | benign | 0.101 | Stabilizing | 0.373 | N | 0.514 | neutral | None | None | None | None | N |
V/K | 0.6993 | likely_pathogenic | 0.5566 | ambiguous | -0.914 | Destabilizing | 0.742 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/L | 0.1961 | likely_benign | 0.1785 | benign | 0.101 | Stabilizing | 0.003 | N | 0.217 | neutral | None | None | None | None | N |
V/M | 0.1701 | likely_benign | 0.1594 | benign | -0.057 | Destabilizing | 0.164 | N | 0.418 | neutral | None | None | None | None | N |
V/N | 0.4872 | ambiguous | 0.4366 | ambiguous | -1.282 | Destabilizing | 0.953 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/P | 0.9882 | likely_pathogenic | 0.977 | pathogenic | -0.391 | Destabilizing | 0.984 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/Q | 0.5121 | ambiguous | 0.4094 | ambiguous | -1.042 | Destabilizing | 0.953 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/R | 0.6322 | likely_pathogenic | 0.467 | ambiguous | -1.022 | Destabilizing | 0.91 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/S | 0.3133 | likely_benign | 0.277 | benign | -1.931 | Destabilizing | 0.59 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/T | 0.2416 | likely_benign | 0.2192 | benign | -1.53 | Destabilizing | 0.037 | N | 0.333 | neutral | None | None | None | None | N |
V/W | 0.9051 | likely_pathogenic | 0.846 | pathogenic | -1.271 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/Y | 0.6734 | likely_pathogenic | 0.6098 | pathogenic | -0.794 | Destabilizing | 0.835 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.