Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9746 | 29461;29462;29463 | chr2:178706638;178706637;178706636 | chr2:179571365;179571364;179571363 |
N2AB | 9429 | 28510;28511;28512 | chr2:178706638;178706637;178706636 | chr2:179571365;179571364;179571363 |
N2A | 8502 | 25729;25730;25731 | chr2:178706638;178706637;178706636 | chr2:179571365;179571364;179571363 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | None | None | 0.131 | 0.093 | 0.372268306217 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2898 | likely_benign | 0.2678 | benign | -2.24 | Highly Destabilizing | 0.002 | N | 0.272 | neutral | None | None | None | None | N |
F/C | 0.2351 | likely_benign | 0.1929 | benign | -0.963 | Destabilizing | 0.427 | N | 0.416 | neutral | None | None | None | None | N |
F/D | 0.6699 | likely_pathogenic | 0.5701 | pathogenic | -0.642 | Destabilizing | 0.018 | N | 0.416 | neutral | None | None | None | None | N |
F/E | 0.683 | likely_pathogenic | 0.6261 | pathogenic | -0.586 | Destabilizing | 0.009 | N | 0.369 | neutral | None | None | None | None | N |
F/G | 0.6649 | likely_pathogenic | 0.5535 | ambiguous | -2.551 | Highly Destabilizing | 0.009 | N | 0.351 | neutral | None | None | None | None | N |
F/H | 0.2998 | likely_benign | 0.306 | benign | -0.765 | Destabilizing | None | N | 0.216 | neutral | None | None | None | None | N |
F/I | 0.0993 | likely_benign | 0.0898 | benign | -1.321 | Destabilizing | None | N | 0.079 | neutral | None | None | None | None | N |
F/K | 0.6031 | likely_pathogenic | 0.5659 | pathogenic | -1.002 | Destabilizing | 0.018 | N | 0.378 | neutral | None | None | None | None | N |
F/L | 0.4035 | ambiguous | 0.4117 | ambiguous | -1.321 | Destabilizing | None | N | 0.075 | neutral | None | None | None | None | N |
F/M | 0.2597 | likely_benign | 0.2628 | benign | -0.938 | Destabilizing | 0.022 | N | 0.333 | neutral | None | None | None | None | N |
F/N | 0.3601 | ambiguous | 0.3089 | benign | -0.901 | Destabilizing | 0.009 | N | 0.415 | neutral | None | None | None | None | N |
F/P | 0.9917 | likely_pathogenic | 0.9725 | pathogenic | -1.619 | Destabilizing | 0.085 | N | 0.5 | neutral | None | None | None | None | N |
F/Q | 0.4874 | ambiguous | 0.4624 | ambiguous | -1.055 | Destabilizing | 0.044 | N | 0.499 | neutral | None | None | None | None | N |
F/R | 0.4836 | ambiguous | 0.4296 | ambiguous | -0.273 | Destabilizing | 0.044 | N | 0.481 | neutral | None | None | None | None | N |
F/S | 0.1941 | likely_benign | 0.1611 | benign | -1.748 | Destabilizing | None | N | 0.131 | neutral | None | None | None | None | N |
F/T | 0.2403 | likely_benign | 0.2162 | benign | -1.606 | Destabilizing | None | N | 0.149 | neutral | None | None | None | None | N |
F/V | 0.1037 | likely_benign | 0.0986 | benign | -1.619 | Destabilizing | None | N | 0.115 | neutral | None | None | None | None | N |
F/W | 0.3946 | ambiguous | 0.3573 | ambiguous | -0.506 | Destabilizing | 0.497 | N | 0.362 | neutral | None | None | None | None | N |
F/Y | 0.1551 | likely_benign | 0.1447 | benign | -0.686 | Destabilizing | 0.007 | N | 0.317 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.