Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9766 | 29521;29522;29523 | chr2:178706578;178706577;178706576 | chr2:179571305;179571304;179571303 |
N2AB | 9449 | 28570;28571;28572 | chr2:178706578;178706577;178706576 | chr2:179571305;179571304;179571303 |
N2A | 8522 | 25789;25790;25791 | chr2:178706578;178706577;178706576 | chr2:179571305;179571304;179571303 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs879033462 | None | 0.999 | None | 0.824 | 0.526 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1515 | likely_benign | 0.1535 | benign | -0.853 | Destabilizing | 0.543 | D | 0.234 | neutral | None | None | None | None | N |
S/C | 0.4307 | ambiguous | 0.3597 | ambiguous | -0.681 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/D | 0.9726 | likely_pathogenic | 0.9187 | pathogenic | -0.642 | Destabilizing | 0.996 | D | 0.537 | neutral | None | None | None | None | N |
S/E | 0.9474 | likely_pathogenic | 0.922 | pathogenic | -0.643 | Destabilizing | 0.996 | D | 0.497 | neutral | None | None | None | None | N |
S/F | 0.8914 | likely_pathogenic | 0.7666 | pathogenic | -1.17 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
S/G | 0.3074 | likely_benign | 0.2285 | benign | -1.081 | Destabilizing | 0.992 | D | 0.467 | neutral | None | None | None | None | N |
S/H | 0.9315 | likely_pathogenic | 0.8633 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/I | 0.8287 | likely_pathogenic | 0.7327 | pathogenic | -0.352 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
S/K | 0.9804 | likely_pathogenic | 0.9647 | pathogenic | -0.758 | Destabilizing | 0.996 | D | 0.495 | neutral | None | None | None | None | N |
S/L | 0.5833 | likely_pathogenic | 0.4063 | ambiguous | -0.352 | Destabilizing | 0.992 | D | 0.614 | neutral | None | None | None | None | N |
S/M | 0.6893 | likely_pathogenic | 0.6209 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
S/N | 0.7272 | likely_pathogenic | 0.5757 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
S/P | 0.9943 | likely_pathogenic | 0.9777 | pathogenic | -0.488 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
S/Q | 0.9098 | likely_pathogenic | 0.8942 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
S/R | 0.9579 | likely_pathogenic | 0.9214 | pathogenic | -0.611 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
S/T | 0.2762 | likely_benign | 0.1988 | benign | -0.819 | Destabilizing | 0.989 | D | 0.449 | neutral | None | None | None | None | N |
S/V | 0.8026 | likely_pathogenic | 0.7019 | pathogenic | -0.488 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/W | 0.9529 | likely_pathogenic | 0.8785 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
S/Y | 0.8641 | likely_pathogenic | 0.7113 | pathogenic | -0.857 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.