Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 985 | 3178;3179;3180 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
N2AB | 985 | 3178;3179;3180 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
N2A | 985 | 3178;3179;3180 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
N2B | 939 | 3040;3041;3042 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
Novex-1 | 939 | 3040;3041;3042 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
Novex-2 | 939 | 3040;3041;3042 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
Novex-3 | 985 | 3178;3179;3180 | chr2:178782953;178782952;178782951 | chr2:179647680;179647679;179647678 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.009 | N | 0.231 | 0.333 | 0.271763555656 | gnomAD-4.0.0 | 1.59053E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85657E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1957 | likely_benign | 0.218 | benign | -0.24 | Destabilizing | 0.25 | N | 0.374 | neutral | None | None | None | None | I |
S/C | 0.5429 | ambiguous | 0.5837 | pathogenic | -0.299 | Destabilizing | 0.009 | N | 0.324 | neutral | D | 0.551943307 | None | None | I |
S/D | 0.5169 | ambiguous | 0.5482 | ambiguous | 0.345 | Stabilizing | 0.447 | N | 0.277 | neutral | None | None | None | None | I |
S/E | 0.7032 | likely_pathogenic | 0.7546 | pathogenic | 0.253 | Stabilizing | 0.617 | D | 0.269 | neutral | None | None | None | None | I |
S/F | 0.8315 | likely_pathogenic | 0.8683 | pathogenic | -0.889 | Destabilizing | 0.92 | D | 0.423 | neutral | None | None | None | None | I |
S/G | 0.1679 | likely_benign | 0.1849 | benign | -0.334 | Destabilizing | 0.201 | N | 0.274 | neutral | N | 0.514003389 | None | None | I |
S/H | 0.633 | likely_pathogenic | 0.6792 | pathogenic | -0.79 | Destabilizing | 0.92 | D | 0.367 | neutral | None | None | None | None | I |
S/I | 0.7168 | likely_pathogenic | 0.7813 | pathogenic | -0.125 | Destabilizing | 0.81 | D | 0.42 | neutral | N | 0.516425979 | None | None | I |
S/K | 0.8465 | likely_pathogenic | 0.8859 | pathogenic | -0.338 | Destabilizing | 0.447 | N | 0.282 | neutral | None | None | None | None | I |
S/L | 0.4577 | ambiguous | 0.5056 | ambiguous | -0.125 | Destabilizing | 0.447 | N | 0.397 | neutral | None | None | None | None | I |
S/M | 0.5769 | likely_pathogenic | 0.6379 | pathogenic | -0.052 | Destabilizing | 0.992 | D | 0.369 | neutral | None | None | None | None | I |
S/N | 0.1549 | likely_benign | 0.1669 | benign | -0.111 | Destabilizing | 0.004 | N | 0.217 | neutral | N | 0.497580667 | None | None | I |
S/P | 0.4118 | ambiguous | 0.3971 | ambiguous | -0.135 | Destabilizing | 0.972 | D | 0.357 | neutral | None | None | None | None | I |
S/Q | 0.7106 | likely_pathogenic | 0.7619 | pathogenic | -0.307 | Destabilizing | 0.85 | D | 0.325 | neutral | None | None | None | None | I |
S/R | 0.824 | likely_pathogenic | 0.8684 | pathogenic | -0.179 | Destabilizing | 0.009 | N | 0.231 | neutral | N | 0.516140575 | None | None | I |
S/T | 0.1882 | likely_benign | 0.2132 | benign | -0.211 | Destabilizing | 0.549 | D | 0.324 | neutral | N | 0.494409306 | None | None | I |
S/V | 0.6899 | likely_pathogenic | 0.7521 | pathogenic | -0.135 | Destabilizing | 0.739 | D | 0.393 | neutral | None | None | None | None | I |
S/W | 0.854 | likely_pathogenic | 0.8838 | pathogenic | -0.939 | Destabilizing | 0.992 | D | 0.547 | neutral | None | None | None | None | I |
S/Y | 0.6277 | likely_pathogenic | 0.6759 | pathogenic | -0.625 | Destabilizing | 0.972 | D | 0.423 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.