Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9910 | 29953;29954;29955 | chr2:178704744;178704743;178704742 | chr2:179569471;179569470;179569469 |
N2AB | 9593 | 29002;29003;29004 | chr2:178704744;178704743;178704742 | chr2:179569471;179569470;179569469 |
N2A | 8666 | 26221;26222;26223 | chr2:178704744;178704743;178704742 | chr2:179569471;179569470;179569469 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.959 | None | 0.394 | 0.347 | 0.480198768302 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3458 | ambiguous | 0.2564 | benign | -0.452 | Destabilizing | 0.116 | N | 0.058 | neutral | None | None | None | None | N |
T/C | 0.9134 | likely_pathogenic | 0.8886 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.39 | neutral | None | None | None | None | N |
T/D | 0.8714 | likely_pathogenic | 0.7822 | pathogenic | 0.289 | Stabilizing | 0.969 | D | 0.309 | neutral | None | None | None | None | N |
T/E | 0.7052 | likely_pathogenic | 0.5592 | ambiguous | 0.241 | Stabilizing | 0.939 | D | 0.312 | neutral | None | None | None | None | N |
T/F | 0.8053 | likely_pathogenic | 0.6842 | pathogenic | -0.784 | Destabilizing | 0.999 | D | 0.425 | neutral | None | None | None | None | N |
T/G | 0.8719 | likely_pathogenic | 0.8222 | pathogenic | -0.631 | Destabilizing | 0.927 | D | 0.311 | neutral | None | None | None | None | N |
T/H | 0.7418 | likely_pathogenic | 0.6027 | pathogenic | -0.912 | Destabilizing | 0.995 | D | 0.409 | neutral | None | None | None | None | N |
T/I | 0.5671 | likely_pathogenic | 0.4294 | ambiguous | -0.092 | Destabilizing | 0.994 | D | 0.393 | neutral | None | None | None | None | N |
T/K | 0.6539 | likely_pathogenic | 0.4997 | ambiguous | -0.424 | Destabilizing | 0.921 | D | 0.319 | neutral | None | None | None | None | N |
T/L | 0.4484 | ambiguous | 0.3335 | benign | -0.092 | Destabilizing | 0.969 | D | 0.312 | neutral | None | None | None | None | N |
T/M | 0.2407 | likely_benign | 0.1679 | benign | 0.024 | Stabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | N |
T/N | 0.5166 | ambiguous | 0.378 | ambiguous | -0.268 | Destabilizing | 0.969 | D | 0.299 | neutral | None | None | None | None | N |
T/P | 0.7989 | likely_pathogenic | 0.7445 | pathogenic | -0.181 | Destabilizing | 0.994 | D | 0.391 | neutral | None | None | None | None | N |
T/Q | 0.647 | likely_pathogenic | 0.4926 | ambiguous | -0.447 | Destabilizing | 0.736 | D | 0.184 | neutral | None | None | None | None | N |
T/R | 0.6063 | likely_pathogenic | 0.45 | ambiguous | -0.195 | Destabilizing | 0.959 | D | 0.394 | neutral | None | None | None | None | N |
T/S | 0.4477 | ambiguous | 0.3375 | benign | -0.524 | Destabilizing | 0.276 | N | 0.073 | neutral | None | None | None | None | N |
T/V | 0.4208 | ambiguous | 0.3206 | benign | -0.181 | Destabilizing | 0.969 | D | 0.246 | neutral | None | None | None | None | N |
T/W | 0.9371 | likely_pathogenic | 0.904 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.482 | neutral | None | None | None | None | N |
T/Y | 0.7829 | likely_pathogenic | 0.6917 | pathogenic | -0.494 | Destabilizing | 0.999 | D | 0.425 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.