Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9912 | 29959;29960;29961 | chr2:178704738;178704737;178704736 | chr2:179569465;179569464;179569463 |
N2AB | 9595 | 29008;29009;29010 | chr2:178704738;178704737;178704736 | chr2:179569465;179569464;179569463 |
N2A | 8668 | 26227;26228;26229 | chr2:178704738;178704737;178704736 | chr2:179569465;179569464;179569463 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | None | None | 0.997 | None | 0.476 | 0.311 | 0.754980121303 | gnomAD-4.0.0 | 1.59922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4974 | ambiguous | 0.5664 | pathogenic | -1.011 | Destabilizing | 0.525 | D | 0.387 | neutral | None | None | None | None | N |
L/C | 0.7912 | likely_pathogenic | 0.8449 | pathogenic | -0.761 | Destabilizing | 0.998 | D | 0.391 | neutral | None | None | None | None | N |
L/D | 0.8971 | likely_pathogenic | 0.9175 | pathogenic | -0.447 | Destabilizing | 0.728 | D | 0.486 | neutral | None | None | None | None | N |
L/E | 0.5623 | ambiguous | 0.6047 | pathogenic | -0.5 | Destabilizing | 0.016 | N | 0.399 | neutral | None | None | None | None | N |
L/F | 0.2898 | likely_benign | 0.3273 | benign | -0.735 | Destabilizing | 0.012 | N | 0.158 | neutral | None | None | None | None | N |
L/G | 0.8143 | likely_pathogenic | 0.8539 | pathogenic | -1.241 | Destabilizing | 0.842 | D | 0.474 | neutral | None | None | None | None | N |
L/H | 0.5449 | ambiguous | 0.6157 | pathogenic | -0.368 | Destabilizing | 0.993 | D | 0.468 | neutral | None | None | None | None | N |
L/I | 0.1766 | likely_benign | 0.1905 | benign | -0.501 | Destabilizing | 0.016 | N | 0.227 | neutral | None | None | None | None | N |
L/K | 0.4637 | ambiguous | 0.5143 | ambiguous | -0.7 | Destabilizing | 0.728 | D | 0.489 | neutral | None | None | None | None | N |
L/M | 0.1867 | likely_benign | 0.2092 | benign | -0.481 | Destabilizing | 0.966 | D | 0.336 | neutral | None | None | None | None | N |
L/N | 0.7332 | likely_pathogenic | 0.7738 | pathogenic | -0.556 | Destabilizing | 0.949 | D | 0.478 | neutral | None | None | None | None | N |
L/P | 0.572 | likely_pathogenic | 0.6474 | pathogenic | -0.637 | Destabilizing | 0.974 | D | 0.493 | neutral | None | None | None | None | N |
L/Q | 0.3077 | likely_benign | 0.3516 | ambiguous | -0.759 | Destabilizing | 0.904 | D | 0.486 | neutral | None | None | None | None | N |
L/R | 0.386 | ambiguous | 0.4322 | ambiguous | -0.074 | Destabilizing | 0.949 | D | 0.485 | neutral | None | None | None | None | N |
L/S | 0.5815 | likely_pathogenic | 0.6487 | pathogenic | -1.071 | Destabilizing | 0.136 | N | 0.354 | neutral | None | None | None | None | N |
L/T | 0.4326 | ambiguous | 0.4742 | ambiguous | -1.014 | Destabilizing | 0.067 | N | 0.275 | neutral | None | None | None | None | N |
L/V | 0.1875 | likely_benign | 0.2111 | benign | -0.637 | Destabilizing | 0.454 | N | 0.359 | neutral | None | None | None | None | N |
L/W | 0.5354 | ambiguous | 0.5908 | pathogenic | -0.757 | Destabilizing | 0.997 | D | 0.476 | neutral | None | None | None | None | N |
L/Y | 0.6649 | likely_pathogenic | 0.7244 | pathogenic | -0.539 | Destabilizing | 0.904 | D | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.