Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9928 | 30007;30008;30009 | chr2:178704690;178704689;178704688 | chr2:179569417;179569416;179569415 |
N2AB | 9611 | 29056;29057;29058 | chr2:178704690;178704689;178704688 | chr2:179569417;179569416;179569415 |
N2A | 8684 | 26275;26276;26277 | chr2:178704690;178704689;178704688 | chr2:179569417;179569416;179569415 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | None | 0.753 | 0.618 | 0.549504238362 | gnomAD-4.0.0 | 6.8528E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00165E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7831 | likely_pathogenic | 0.7512 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/C | 0.9964 | likely_pathogenic | 0.9954 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/D | 0.9591 | likely_pathogenic | 0.957 | pathogenic | -0.497 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/E | 0.9058 | likely_pathogenic | 0.8964 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/F | 0.9982 | likely_pathogenic | 0.9978 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
P/G | 0.9625 | likely_pathogenic | 0.9577 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
P/H | 0.9351 | likely_pathogenic | 0.919 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
P/I | 0.9917 | likely_pathogenic | 0.9908 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/K | 0.9205 | likely_pathogenic | 0.9132 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/L | 0.9119 | likely_pathogenic | 0.8853 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
P/M | 0.989 | likely_pathogenic | 0.9871 | pathogenic | -0.567 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
P/N | 0.9689 | likely_pathogenic | 0.9674 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/Q | 0.8679 | likely_pathogenic | 0.851 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
P/R | 0.8541 | likely_pathogenic | 0.8279 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
P/S | 0.8533 | likely_pathogenic | 0.8327 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/T | 0.8824 | likely_pathogenic | 0.8681 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/V | 0.9788 | likely_pathogenic | 0.976 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/W | 0.9982 | likely_pathogenic | 0.9971 | pathogenic | -0.727 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
P/Y | 0.9965 | likely_pathogenic | 0.9951 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.