Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9931 | 30016;30017;30018 | chr2:178704681;178704680;178704679 | chr2:179569408;179569407;179569406 |
N2AB | 9614 | 29065;29066;29067 | chr2:178704681;178704680;178704679 | chr2:179569408;179569407;179569406 |
N2A | 8687 | 26284;26285;26286 | chr2:178704681;178704680;178704679 | chr2:179569408;179569407;179569406 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.801 | None | 0.502 | 0.182 | 0.136095386433 | gnomAD-4.0.0 | 1.59616E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86561E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7223 | likely_pathogenic | 0.7281 | pathogenic | -0.003 | Destabilizing | 0.029 | N | 0.229 | neutral | None | None | None | None | I |
K/C | 0.9334 | likely_pathogenic | 0.9435 | pathogenic | -0.489 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | I |
K/D | 0.8982 | likely_pathogenic | 0.9047 | pathogenic | -0.204 | Destabilizing | 0.842 | D | 0.527 | neutral | None | None | None | None | I |
K/E | 0.5757 | likely_pathogenic | 0.5458 | ambiguous | -0.215 | Destabilizing | 0.454 | N | 0.482 | neutral | None | None | None | None | I |
K/F | 0.9695 | likely_pathogenic | 0.9717 | pathogenic | -0.34 | Destabilizing | 0.991 | D | 0.599 | neutral | None | None | None | None | I |
K/G | 0.8756 | likely_pathogenic | 0.8776 | pathogenic | -0.136 | Destabilizing | 0.842 | D | 0.555 | neutral | None | None | None | None | I |
K/H | 0.5947 | likely_pathogenic | 0.6305 | pathogenic | -0.248 | Destabilizing | 0.974 | D | 0.561 | neutral | None | None | None | None | I |
K/I | 0.7357 | likely_pathogenic | 0.7276 | pathogenic | 0.259 | Stabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | I |
K/L | 0.7318 | likely_pathogenic | 0.7405 | pathogenic | 0.259 | Stabilizing | 0.842 | D | 0.557 | neutral | None | None | None | None | I |
K/M | 0.639 | likely_pathogenic | 0.6041 | pathogenic | -0.063 | Destabilizing | 0.966 | D | 0.567 | neutral | None | None | None | None | I |
K/N | 0.7474 | likely_pathogenic | 0.782 | pathogenic | -0.047 | Destabilizing | 0.801 | D | 0.502 | neutral | None | None | None | None | I |
K/P | 0.8612 | likely_pathogenic | 0.8734 | pathogenic | 0.196 | Stabilizing | 0.915 | D | 0.579 | neutral | None | None | None | None | I |
K/Q | 0.2914 | likely_benign | 0.309 | benign | -0.187 | Destabilizing | 0.051 | N | 0.251 | neutral | None | None | None | None | I |
K/R | 0.1458 | likely_benign | 0.152 | benign | -0.123 | Destabilizing | 0.669 | D | 0.44 | neutral | None | None | None | None | I |
K/S | 0.7362 | likely_pathogenic | 0.7683 | pathogenic | -0.436 | Destabilizing | 0.525 | D | 0.468 | neutral | None | None | None | None | I |
K/T | 0.3704 | ambiguous | 0.3723 | ambiguous | -0.325 | Destabilizing | 0.022 | N | 0.22 | neutral | None | None | None | None | I |
K/V | 0.6761 | likely_pathogenic | 0.6915 | pathogenic | 0.196 | Stabilizing | 0.842 | D | 0.549 | neutral | None | None | None | None | I |
K/W | 0.9775 | likely_pathogenic | 0.9756 | pathogenic | -0.429 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | I |
K/Y | 0.9396 | likely_pathogenic | 0.9354 | pathogenic | -0.071 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.