Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9957 | 30094;30095;30096 | chr2:178704603;178704602;178704601 | chr2:179569330;179569329;179569328 |
N2AB | 9640 | 29143;29144;29145 | chr2:178704603;178704602;178704601 | chr2:179569330;179569329;179569328 |
N2A | 8713 | 26362;26363;26364 | chr2:178704603;178704602;178704601 | chr2:179569330;179569329;179569328 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2154291224 | None | None | None | 0.411 | 0.098 | 0.266843984389 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1581 | likely_benign | 0.1499 | benign | -1.14 | Destabilizing | 0.037 | N | 0.427 | neutral | None | None | None | None | N |
T/C | 0.508 | ambiguous | 0.5435 | ambiguous | -0.9 | Destabilizing | 0.859 | D | 0.611 | neutral | None | None | None | None | N |
T/D | 0.8234 | likely_pathogenic | 0.7671 | pathogenic | -1.818 | Destabilizing | 0.364 | N | 0.635 | neutral | None | None | None | None | N |
T/E | 0.5064 | ambiguous | 0.4727 | ambiguous | -1.567 | Destabilizing | 0.364 | N | 0.617 | neutral | None | None | None | None | N |
T/F | 0.3207 | likely_benign | 0.2883 | benign | -0.662 | Destabilizing | 0.22 | N | 0.612 | neutral | None | None | None | None | N |
T/G | 0.6286 | likely_pathogenic | 0.6039 | pathogenic | -1.587 | Destabilizing | 0.364 | N | 0.615 | neutral | None | None | None | None | N |
T/H | 0.3179 | likely_benign | 0.3187 | benign | -1.658 | Destabilizing | 0.958 | D | 0.594 | neutral | None | None | None | None | N |
T/I | 0.0904 | likely_benign | 0.0929 | benign | 0.054 | Stabilizing | None | N | 0.411 | neutral | None | None | None | None | N |
T/K | 0.1952 | likely_benign | 0.2022 | benign | -0.541 | Destabilizing | 0.301 | N | 0.622 | neutral | None | None | None | None | N |
T/L | 0.125 | likely_benign | 0.1158 | benign | 0.054 | Stabilizing | None | N | 0.41 | neutral | None | None | None | None | N |
T/M | 0.1167 | likely_benign | 0.1192 | benign | -0.168 | Destabilizing | 0.497 | N | 0.615 | neutral | None | None | None | None | N |
T/N | 0.3285 | likely_benign | 0.2976 | benign | -1.411 | Destabilizing | 0.859 | D | 0.603 | neutral | None | None | None | None | N |
T/P | 0.9305 | likely_pathogenic | 0.8793 | pathogenic | -0.314 | Destabilizing | 0.822 | D | 0.637 | neutral | None | None | None | None | N |
T/Q | 0.3077 | likely_benign | 0.3025 | benign | -1.041 | Destabilizing | 0.859 | D | 0.609 | neutral | None | None | None | None | N |
T/R | 0.167 | likely_benign | 0.1667 | benign | -0.9 | Destabilizing | 0.602 | D | 0.639 | neutral | None | None | None | None | N |
T/S | 0.2325 | likely_benign | 0.2215 | benign | -1.58 | Destabilizing | 0.151 | N | 0.521 | neutral | None | None | None | None | N |
T/V | 0.1114 | likely_benign | 0.1152 | benign | -0.314 | Destabilizing | 0.004 | N | 0.468 | neutral | None | None | None | None | N |
T/W | 0.7417 | likely_pathogenic | 0.7048 | pathogenic | -0.936 | Destabilizing | 0.958 | D | 0.614 | neutral | None | None | None | None | N |
T/Y | 0.4061 | ambiguous | 0.3758 | ambiguous | -0.504 | Destabilizing | 0.667 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.