Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9959 | 30100;30101;30102 | chr2:178704597;178704596;178704595 | chr2:179569324;179569323;179569322 |
N2AB | 9642 | 29149;29150;29151 | chr2:178704597;178704596;178704595 | chr2:179569324;179569323;179569322 |
N2A | 8715 | 26368;26369;26370 | chr2:178704597;178704596;178704595 | chr2:179569324;179569323;179569322 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.001 | None | 0.307 | 0.335 | 0.24896430686 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6796 | likely_pathogenic | 0.6394 | pathogenic | -1.072 | Destabilizing | 0.055 | N | 0.415 | neutral | None | None | None | None | N |
R/C | 0.2625 | likely_benign | 0.266 | benign | -1.069 | Destabilizing | 0.883 | D | 0.479 | neutral | None | None | None | None | N |
R/D | 0.9405 | likely_pathogenic | 0.927 | pathogenic | -0.277 | Destabilizing | 0.124 | N | 0.531 | neutral | None | None | None | None | N |
R/E | 0.6202 | likely_pathogenic | 0.5937 | pathogenic | -0.149 | Destabilizing | 0.055 | N | 0.476 | neutral | None | None | None | None | N |
R/F | 0.7067 | likely_pathogenic | 0.6932 | pathogenic | -0.863 | Destabilizing | 0.497 | N | 0.503 | neutral | None | None | None | None | N |
R/G | 0.7112 | likely_pathogenic | 0.6735 | pathogenic | -1.391 | Destabilizing | 0.081 | N | 0.486 | neutral | None | None | None | None | N |
R/H | 0.1217 | likely_benign | 0.1146 | benign | -1.535 | Destabilizing | 0.667 | D | 0.475 | neutral | None | None | None | None | N |
R/I | 0.2898 | likely_benign | 0.2783 | benign | -0.208 | Destabilizing | 0.001 | N | 0.433 | neutral | None | None | None | None | N |
R/K | 0.1117 | likely_benign | 0.1097 | benign | -1.193 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | N |
R/L | 0.3581 | ambiguous | 0.3382 | benign | -0.208 | Destabilizing | 0.02 | N | 0.449 | neutral | None | None | None | None | N |
R/M | 0.4104 | ambiguous | 0.3865 | ambiguous | -0.478 | Destabilizing | 0.497 | N | 0.494 | neutral | None | None | None | None | N |
R/N | 0.8243 | likely_pathogenic | 0.7999 | pathogenic | -0.612 | Destabilizing | 0.001 | N | 0.291 | neutral | None | None | None | None | N |
R/P | 0.9958 | likely_pathogenic | 0.994 | pathogenic | -0.477 | Destabilizing | 0.364 | N | 0.559 | neutral | None | None | None | None | N |
R/Q | 0.1633 | likely_benign | 0.1558 | benign | -0.791 | Destabilizing | 0.22 | N | 0.468 | neutral | None | None | None | None | N |
R/S | 0.7475 | likely_pathogenic | 0.7157 | pathogenic | -1.44 | Destabilizing | 0.042 | N | 0.469 | neutral | None | None | None | None | N |
R/T | 0.3531 | ambiguous | 0.306 | benign | -1.129 | Destabilizing | 0.001 | N | 0.307 | neutral | None | None | None | None | N |
R/V | 0.4109 | ambiguous | 0.4005 | ambiguous | -0.477 | Destabilizing | 0.02 | N | 0.454 | neutral | None | None | None | None | N |
R/W | 0.3058 | likely_benign | 0.2865 | benign | -0.445 | Destabilizing | 0.958 | D | 0.501 | neutral | None | None | None | None | N |
R/Y | 0.5765 | likely_pathogenic | 0.5699 | pathogenic | -0.177 | Destabilizing | 0.667 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.