Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9960 | 30103;30104;30105 | chr2:178704594;178704593;178704592 | chr2:179569321;179569320;179569319 |
N2AB | 9643 | 29152;29153;29154 | chr2:178704594;178704593;178704592 | chr2:179569321;179569320;179569319 |
N2A | 8716 | 26371;26372;26373 | chr2:178704594;178704593;178704592 | chr2:179569321;179569320;179569319 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | None | 0.245 | 0.055 | 0.247322355667 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9433 | likely_pathogenic | 0.9541 | pathogenic | -2.499 | Highly Destabilizing | 0.104 | N | 0.617 | neutral | None | None | None | None | N |
V/C | 0.9724 | likely_pathogenic | 0.9799 | pathogenic | -2.125 | Highly Destabilizing | 0.968 | D | 0.769 | deleterious | None | None | None | None | N |
V/D | 0.9977 | likely_pathogenic | 0.9974 | pathogenic | -3.552 | Highly Destabilizing | 0.667 | D | 0.873 | deleterious | None | None | None | None | N |
V/E | 0.9891 | likely_pathogenic | 0.9894 | pathogenic | -3.235 | Highly Destabilizing | 0.726 | D | 0.85 | deleterious | None | None | None | None | N |
V/F | 0.8339 | likely_pathogenic | 0.8569 | pathogenic | -1.422 | Destabilizing | 0.497 | N | 0.771 | deleterious | None | None | None | None | N |
V/G | 0.9679 | likely_pathogenic | 0.9669 | pathogenic | -3.116 | Highly Destabilizing | 0.667 | D | 0.859 | deleterious | None | None | None | None | N |
V/H | 0.9965 | likely_pathogenic | 0.9966 | pathogenic | -3.031 | Highly Destabilizing | 0.968 | D | 0.865 | deleterious | None | None | None | None | N |
V/I | 0.0823 | likely_benign | 0.0921 | benign | -0.7 | Destabilizing | None | N | 0.245 | neutral | None | None | None | None | N |
V/K | 0.9886 | likely_pathogenic | 0.9889 | pathogenic | -2.095 | Highly Destabilizing | 0.726 | D | 0.848 | deleterious | None | None | None | None | N |
V/L | 0.5353 | ambiguous | 0.6302 | pathogenic | -0.7 | Destabilizing | 0.009 | N | 0.374 | neutral | None | None | None | None | N |
V/M | 0.6515 | likely_pathogenic | 0.717 | pathogenic | -0.992 | Destabilizing | 0.567 | D | 0.669 | neutral | None | None | None | None | N |
V/N | 0.9909 | likely_pathogenic | 0.9914 | pathogenic | -2.785 | Highly Destabilizing | 0.89 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -1.282 | Destabilizing | 0.89 | D | 0.85 | deleterious | None | None | None | None | N |
V/Q | 0.9888 | likely_pathogenic | 0.9896 | pathogenic | -2.427 | Highly Destabilizing | 0.89 | D | 0.878 | deleterious | None | None | None | None | N |
V/R | 0.9849 | likely_pathogenic | 0.9836 | pathogenic | -2.151 | Highly Destabilizing | 0.726 | D | 0.879 | deleterious | None | None | None | None | N |
V/S | 0.9847 | likely_pathogenic | 0.9859 | pathogenic | -3.314 | Highly Destabilizing | 0.726 | D | 0.821 | deleterious | None | None | None | None | N |
V/T | 0.9646 | likely_pathogenic | 0.9708 | pathogenic | -2.837 | Highly Destabilizing | 0.272 | N | 0.654 | neutral | None | None | None | None | N |
V/W | 0.9963 | likely_pathogenic | 0.9968 | pathogenic | -2.05 | Highly Destabilizing | 0.968 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.9837 | likely_pathogenic | 0.9846 | pathogenic | -1.743 | Destabilizing | 0.726 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.