Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9968 | 30127;30128;30129 | chr2:178704570;178704569;178704568 | chr2:179569297;179569296;179569295 |
N2AB | 9651 | 29176;29177;29178 | chr2:178704570;178704569;178704568 | chr2:179569297;179569296;179569295 |
N2A | 8724 | 26395;26396;26397 | chr2:178704570;178704569;178704568 | chr2:179569297;179569296;179569295 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.98 | None | 0.587 | 0.511 | 0.531873083431 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 2.2899E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.408 | ambiguous | 0.4134 | ambiguous | -0.666 | Destabilizing | 0.97 | D | 0.602 | neutral | None | None | None | None | N |
Q/C | 0.9513 | likely_pathogenic | 0.9558 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
Q/D | 0.8537 | likely_pathogenic | 0.8419 | pathogenic | -0.531 | Destabilizing | 0.942 | D | 0.565 | neutral | None | None | None | None | N |
Q/E | 0.1123 | likely_benign | 0.1045 | benign | -0.456 | Destabilizing | 0.248 | N | 0.11 | neutral | None | None | None | None | N |
Q/F | 0.9773 | likely_pathogenic | 0.977 | pathogenic | -0.412 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
Q/G | 0.6161 | likely_pathogenic | 0.6027 | pathogenic | -1.004 | Destabilizing | 0.985 | D | 0.588 | neutral | None | None | None | None | N |
Q/H | 0.7749 | likely_pathogenic | 0.7562 | pathogenic | -0.852 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
Q/I | 0.8449 | likely_pathogenic | 0.8412 | pathogenic | 0.184 | Stabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
Q/K | 0.279 | likely_benign | 0.2534 | benign | -0.365 | Destabilizing | 0.835 | D | 0.569 | neutral | None | None | None | None | N |
Q/L | 0.6226 | likely_pathogenic | 0.6006 | pathogenic | 0.184 | Stabilizing | 0.98 | D | 0.587 | neutral | None | None | None | None | N |
Q/M | 0.6838 | likely_pathogenic | 0.6856 | pathogenic | 0.659 | Stabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
Q/N | 0.7218 | likely_pathogenic | 0.6929 | pathogenic | -0.89 | Destabilizing | 0.985 | D | 0.544 | neutral | None | None | None | None | N |
Q/P | 0.911 | likely_pathogenic | 0.9155 | pathogenic | -0.068 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
Q/R | 0.3278 | likely_benign | 0.3194 | benign | -0.255 | Destabilizing | 0.071 | N | 0.237 | neutral | None | None | None | None | N |
Q/S | 0.5447 | ambiguous | 0.5347 | ambiguous | -0.983 | Destabilizing | 0.97 | D | 0.565 | neutral | None | None | None | None | N |
Q/T | 0.5004 | ambiguous | 0.4929 | ambiguous | -0.716 | Destabilizing | 0.985 | D | 0.584 | neutral | None | None | None | None | N |
Q/V | 0.7192 | likely_pathogenic | 0.7226 | pathogenic | -0.068 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
Q/W | 0.971 | likely_pathogenic | 0.9711 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
Q/Y | 0.9511 | likely_pathogenic | 0.946 | pathogenic | -0.063 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.